Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cux1P53564 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cux1P53564 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC9.87□□□□□ -0.83
Cux1P53564 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Cux1P53564 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cux1P53564 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cux1P53564 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cux1P53564 Mir466f-4-201ENSMUST00000116930 121 ntBASIC9.87□□□□□ -0.83
Cux1P53564 Gm12399-201ENSMUST00000121475 446 ntBASIC9.87□□□□□ -0.83
Cux1P53564 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC9.87□□□□□ -0.83
Cux1P53564 Gm25487-201ENSMUST00000158725 125 ntBASIC9.87□□□□□ -0.83
Cux1P53564 Gm27960-201ENSMUST00000183445 184 ntBASIC9.87□□□□□ -0.83
Cux1P53564 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC9.87□□□□□ -0.83
Cux1P53564 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC9.87□□□□□ -0.83
Cux1P53564 Mir6906-201ENSMUST00000198998 58 ntBASIC9.87□□□□□ -0.83
Cux1P53564 Gm43215-201ENSMUST00000199108 252 ntBASIC9.87□□□□□ -0.83
Cux1P53564 Gm44213-201ENSMUST00000204977 703 ntBASIC9.87□□□□□ -0.83
Cux1P53564 AC122371.2-201ENSMUST00000220583 366 ntBASIC9.87□□□□□ -0.83
Cux1P53564 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC9.87□□□□□ -0.83
Cux1P53564 Gm5341-201ENSMUST00000058881 489 ntBASIC9.87□□□□□ -0.83
Cux1P53564 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Cux1P53564 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cux1P53564 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cux1P53564 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Cux1P53564 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cux1P53564 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cux1P53564 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Cux1P53564 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Cux1P53564 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Cux1P53564 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cux1P53564 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cux1P53564 Gm21036-201ENSMUST00000207544 2611 ntBASIC9.87□□□□□ -0.83
Cux1P53564 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Cux1P53564 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cux1P53564 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cux1P53564 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cux1P53564 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Cux1P53564 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cux1P53564 Gm15616-201ENSMUST00000118662 375 ntBASIC9.87□□□□□ -0.83
Cux1P53564 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC9.87□□□□□ -0.83
Cux1P53564 Gm11852-201ENSMUST00000120806 222 ntBASIC9.87□□□□□ -0.83
Cux1P53564 Gm8317-201ENSMUST00000121261 471 ntBASIC9.87□□□□□ -0.83
Cux1P53564 Gm25057-201ENSMUST00000157366 88 ntBASIC9.87□□□□□ -0.83
Cux1P53564 Gm23050-201ENSMUST00000158775 165 ntBASIC9.87□□□□□ -0.83
Cux1P53564 Gm26057-201ENSMUST00000178099 165 ntBASIC9.87□□□□□ -0.83
Cux1P53564 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cux1P53564 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC9.87□□□□□ -0.83
Cux1P53564 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cux1P53564 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cux1P53564 AC158115.1-201ENSMUST00000222830 3182 ntBASIC9.86□□□□□ -0.83
Cux1P53564 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Cux1P53564 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC9.86□□□□□ -0.83
Cux1P53564 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cux1P53564 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cux1P53564 Gm42490-201ENSMUST00000198595 2064 ntBASIC9.86□□□□□ -0.83
Cux1P53564 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC9.86□□□□□ -0.83
Cux1P53564 AC153959.1-201ENSMUST00000213617 1694 ntBASIC9.86□□□□□ -0.83
Cux1P53564 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cux1P53564 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cux1P53564 Gm45073-201ENSMUST00000207688 4247 ntBASIC9.86□□□□□ -0.83
Cux1P53564 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cux1P53564 Gm22952-201ENSMUST00000116720 120 ntBASIC9.86□□□□□ -0.83
Cux1P53564 Gm12901-201ENSMUST00000118690 532 ntBASIC9.86□□□□□ -0.83
Cux1P53564 Gm22276-201ENSMUST00000122469 129 ntBASIC9.86□□□□□ -0.83
Cux1P53564 Gm21756-201ENSMUST00000178380 930 ntBASIC9.86□□□□□ -0.83
Cux1P53564 Gm21405-201ENSMUST00000179024 930 ntBASIC9.86□□□□□ -0.83
Cux1P53564 Gm21191-201ENSMUST00000186484 930 ntBASIC9.86□□□□□ -0.83
Cux1P53564 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cux1P53564 Gm29503-201ENSMUST00000191044 930 ntBASIC9.86□□□□□ -0.83
Cux1P53564 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cux1P53564 AC140409.4-201ENSMUST00000215757 538 ntBASIC9.86□□□□□ -0.83
Cux1P53564 AC133650.1-201ENSMUST00000217243 578 ntBASIC9.86□□□□□ -0.83
Cux1P53564 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC9.86□□□□□ -0.83
Cux1P53564 Gm9237-201ENSMUST00000221499 548 ntBASIC9.86□□□□□ -0.83
Cux1P53564 AC161586.1-201ENSMUST00000223232 547 ntBASIC9.86□□□□□ -0.83
Cux1P53564 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cux1P53564 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cux1P53564 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cux1P53564 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Cux1P53564 Gm38077-201ENSMUST00000193657 3245 ntBASIC9.86□□□□□ -0.83
Cux1P53564 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Cux1P53564 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Cux1P53564 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cux1P53564 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cux1P53564 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
Cux1P53564 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cux1P53564 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cux1P53564 AC130217.2-201ENSMUST00000224009 2990 ntBASIC9.85□□□□□ -0.83
Cux1P53564 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
Cux1P53564 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cux1P53564 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cux1P53564 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cux1P53564 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cux1P53564 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC9.85□□□□□ -0.83
Cux1P53564 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cux1P53564 Gm9521-201ENSMUST00000206656 1516 ntBASIC9.85□□□□□ -0.83
Cux1P53564 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Cux1P53564 Gm13137-201ENSMUST00000118035 345 ntBASIC9.85□□□□□ -0.83
Cux1P53564 Gm11498-201ENSMUST00000120660 949 ntBASIC9.85□□□□□ -0.83
Cux1P53564 Gm11545-201ENSMUST00000146507 375 ntBASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms