Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm28239-201ENSMUST00000190225 447 ntBASIC8.4□□□□□ -1.06
Rfx1P48377 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC8.4□□□□□ -1.06
Rfx1P48377 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rfx1P48377 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rfx1P48377 Gm44972-201ENSMUST00000206419 406 ntBASIC8.4□□□□□ -1.06
Rfx1P48377 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Rfx1P48377 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC8.4□□□□□ -1.06
Rfx1P48377 Gm5119-201ENSMUST00000215858 634 ntBASIC8.4□□□□□ -1.06
Rfx1P48377 Gm18378-201ENSMUST00000216245 628 ntBASIC8.4□□□□□ -1.06
Rfx1P48377 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC8.4□□□□□ -1.06
Rfx1P48377 AC158531.2-201ENSMUST00000224264 473 ntBASIC8.4□□□□□ -1.06
Rfx1P48377 AV026068-229ENSMUST00000225516 595 ntBASIC8.4□□□□□ -1.06
Rfx1P48377 AC167192.1-201ENSMUST00000225908 139 ntBASIC8.4□□□□□ -1.06
Rfx1P48377 AC154838.1-201ENSMUST00000228944 911 ntBASIC8.4□□□□□ -1.06
Rfx1P48377 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Rfx1P48377 Olfr1255-201ENSMUST00000057369 933 ntBASIC8.4□□□□□ -1.06
Rfx1P48377 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rfx1P48377 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rfx1P48377 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Rfx1P48377 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Rfx1P48377 n-R5s97-201ENSMUST00000082585 113 ntBASIC8.4□□□□□ -1.06
Rfx1P48377 Gm26130-201ENSMUST00000083171 138 ntBASIC8.4□□□□□ -1.06
Rfx1P48377 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC8.4□□□□□ -1.06
Rfx1P48377 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Rfx1P48377 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rfx1P48377 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rfx1P48377 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Rfx1P48377 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rfx1P48377 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Rfx1P48377 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Rfx1P48377 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Rfx1P48377 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rfx1P48377 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rfx1P48377 Gm5715-201ENSMUST00000196854 1465 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rfx1P48377 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Rfx1P48377 Gm45001-201ENSMUST00000208279 2515 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Rfx1P48377 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Rfx1P48377 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rfx1P48377 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rfx1P48377 Gm25276-201ENSMUST00000104300 124 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC8.39□□□□□ -1.07
Rfx1P48377 Gm15203-201ENSMUST00000117668 455 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 Gm11207-201ENSMUST00000117824 414 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC8.39□□□□□ -1.07
Rfx1P48377 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Rfx1P48377 Gm10086-201ENSMUST00000136334 354 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rfx1P48377 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rfx1P48377 Gm4835-201ENSMUST00000155839 972 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 Gm22895-201ENSMUST00000157508 308 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 Gm24962-201ENSMUST00000157917 109 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rfx1P48377 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rfx1P48377 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 Gm26197-201ENSMUST00000175033 115 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Rfx1P48377 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Rfx1P48377 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Rfx1P48377 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Rfx1P48377 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 Gm2617-201ENSMUST00000185690 1066 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC8.39□□□□□ -1.07
Rfx1P48377 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC8.39□□□□□ -1.07
Rfx1P48377 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rfx1P48377 Gm4545-201ENSMUST00000190797 603 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rfx1P48377 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rfx1P48377 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rfx1P48377 Gm43093-201ENSMUST00000202439 1213 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 Gm5885-202ENSMUST00000203357 528 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC8.39□□□□□ -1.07
Rfx1P48377 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC8.39□□□□□ -1.07
Rfx1P48377 Gm45240-201ENSMUST00000211437 674 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC8.39□□□□□ -1.07
Rfx1P48377 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC8.39□□□□□ -1.07
Rfx1P48377 AC079644.3-201ENSMUST00000222452 357 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 Gm35619-201ENSMUST00000222548 600 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 AC166822.1-201ENSMUST00000227667 636 ntBASIC8.39□□□□□ -1.07
Rfx1P48377 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC8.39□□□□□ -1.07
Rfx1P48377 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Rfx1P48377 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Rfx1P48377 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Rfx1P48377 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Rfx1P48377 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rfx1P48377 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rfx1P48377 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Rfx1P48377 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rfx1P48377 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC8.38□□□□□ -1.07
Rfx1P48377 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Rfx1P48377 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rfx1P48377 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rfx1P48377 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Rfx1P48377 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC8.38□□□□□ -1.07
Rfx1P48377 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC8.38□□□□□ -1.07
Rfx1P48377 Gm4806-201ENSMUST00000222704 1690 ntBASIC8.38□□□□□ -1.07
Rfx1P48377 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC8.38□□□□□ -1.07
Rfx1P48377 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rfx1P48377 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms