Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm6061-201ENSMUST00000175860 492 ntBASIC7.67□□□□□ -1.18
Traf1P39428 Gm9710-201ENSMUST00000198053 499 ntBASIC7.67□□□□□ -1.18
Traf1P39428 Gm18838-201ENSMUST00000204855 886 ntBASIC7.67□□□□□ -1.18
Traf1P39428 Gm32983-201ENSMUST00000208500 505 ntBASIC7.67□□□□□ -1.18
Traf1P39428 AC154806.1-203ENSMUST00000227370 1032 ntBASIC7.67□□□□□ -1.18
Traf1P39428 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Traf1P39428 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
Traf1P39428 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.67□□□□□ -1.18
Traf1P39428 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Traf1P39428 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Traf1P39428 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC7.67□□□□□ -1.18
Traf1P39428 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Traf1P39428 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Traf1P39428 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.67□□□□□ -1.18
Traf1P39428 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC7.67□□□□□ -1.18
Traf1P39428 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Traf1P39428 Gm9226-201ENSMUST00000188352 3489 ntBASIC7.66□□□□□ -1.18
Traf1P39428 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Traf1P39428 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Traf1P39428 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Traf1P39428 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Traf1P39428 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Traf1P39428 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Traf1P39428 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC7.66□□□□□ -1.18
Traf1P39428 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Traf1P39428 Gm15750-201ENSMUST00000120970 616 ntBASIC7.66□□□□□ -1.18
Traf1P39428 Gm23426-201ENSMUST00000122483 318 ntBASIC7.66□□□□□ -1.18
Traf1P39428 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Traf1P39428 Gm5260-201ENSMUST00000186157 949 ntBASIC7.66□□□□□ -1.18
Traf1P39428 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Traf1P39428 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC7.66□□□□□ -1.18
Traf1P39428 Gm36448-201ENSMUST00000199916 438 ntBASIC7.66□□□□□ -1.18
Traf1P39428 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.66□□□□□ -1.18
Traf1P39428 Gm44823-201ENSMUST00000204775 1107 ntBASIC7.66□□□□□ -1.18
Traf1P39428 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Traf1P39428 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Traf1P39428 AC164295.1-201ENSMUST00000224861 186 ntBASIC7.66□□□□□ -1.18
Traf1P39428 AC116596.2-203ENSMUST00000227345 731 ntBASIC7.66□□□□□ -1.18
Traf1P39428 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.66□□□□□ -1.18
Traf1P39428 Mir138-1-201ENSMUST00000083480 99 ntBASIC7.66□□□□□ -1.18
Traf1P39428 Olfr687-201ENSMUST00000098154 938 ntBASIC7.66□□□□□ -1.18
Traf1P39428 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC7.66□□□□□ -1.18
Traf1P39428 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Traf1P39428 Gm15789-201ENSMUST00000118992 1359 ntBASIC7.66□□□□□ -1.18
Traf1P39428 AC107742.1-201ENSMUST00000227769 1390 ntBASIC7.66□□□□□ -1.18
Traf1P39428 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Traf1P39428 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Traf1P39428 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Traf1P39428 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Traf1P39428 Gm13416-201ENSMUST00000117264 1612 ntBASIC7.66□□□□□ -1.18
Traf1P39428 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC7.66□□□□□ -1.18
Traf1P39428 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Traf1P39428 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Traf1P39428 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Traf1P39428 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
Traf1P39428 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
Traf1P39428 Gm10258-201ENSMUST00000091270 2123 ntBASIC7.66□□□□□ -1.18
Traf1P39428 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Traf1P39428 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Traf1P39428 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Traf1P39428 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Traf1P39428 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Traf1P39428 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC7.65□□□□□ -1.18
Traf1P39428 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Traf1P39428 Gm26422-201ENSMUST00000104276 132 ntBASIC7.65□□□□□ -1.18
Traf1P39428 Gm26144-201ENSMUST00000104475 132 ntBASIC7.65□□□□□ -1.18
Traf1P39428 Gm14870-201ENSMUST00000118414 156 ntBASIC7.65□□□□□ -1.18
Traf1P39428 Gm8534-201ENSMUST00000118553 766 ntBASIC7.65□□□□□ -1.18
Traf1P39428 Gm11341-201ENSMUST00000122316 447 ntBASIC7.65□□□□□ -1.18
Traf1P39428 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Traf1P39428 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Traf1P39428 Gm14747-201ENSMUST00000149888 984 ntBASIC7.65□□□□□ -1.18
Traf1P39428 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Traf1P39428 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Traf1P39428 Gm20432-201ENSMUST00000173716 250 ntBASIC7.65□□□□□ -1.18
Traf1P39428 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Traf1P39428 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Traf1P39428 Gm26738-201ENSMUST00000181312 601 ntBASIC7.65□□□□□ -1.18
Traf1P39428 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC7.65□□□□□ -1.18
Traf1P39428 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.65□□□□□ -1.18
Traf1P39428 Gm28112-201ENSMUST00000190898 1875 ntBASIC7.65□□□□□ -1.18
Traf1P39428 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Traf1P39428 Gm42581-201ENSMUST00000201774 966 ntBASIC7.65□□□□□ -1.18
Traf1P39428 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Traf1P39428 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Traf1P39428 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.65□□□□□ -1.18
Traf1P39428 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Traf1P39428 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7.65□□□□□ -1.18
Traf1P39428 AC140288.1-201ENSMUST00000226329 503 ntBASIC7.65□□□□□ -1.18
Traf1P39428 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Traf1P39428 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Traf1P39428 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Traf1P39428 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Traf1P39428 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Traf1P39428 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC7.65□□□□□ -1.19
Traf1P39428 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Traf1P39428 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Traf1P39428 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Traf1P39428 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Traf1P39428 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms