Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Sftpa1P35242 Gm15275-201ENSMUST00000154752 347 ntBASIC6.11□□□□□ -1.43
Sftpa1P35242 Gm24719-201ENSMUST00000157520 110 ntBASIC6.11□□□□□ -1.43
Sftpa1P35242 Gm22210-201ENSMUST00000158101 144 ntBASIC6.11□□□□□ -1.43
Sftpa1P35242 Gm9064-201ENSMUST00000163579 566 ntBASIC6.11□□□□□ -1.43
Sftpa1P35242 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Sftpa1P35242 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Sftpa1P35242 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.11□□□□□ -1.43
Sftpa1P35242 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.11□□□□□ -1.43
Sftpa1P35242 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Sftpa1P35242 Gm26738-201ENSMUST00000181312 601 ntBASIC6.11□□□□□ -1.43
Sftpa1P35242 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sftpa1P35242 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.11□□□□□ -1.43
Sftpa1P35242 Gm43212-201ENSMUST00000198208 394 ntBASIC6.11□□□□□ -1.43
Sftpa1P35242 BC049739-201ENSMUST00000202626 660 ntBASIC6.11□□□□□ -1.43
Sftpa1P35242 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.11□□□□□ -1.43
Sftpa1P35242 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sftpa1P35242 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sftpa1P35242 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC6.11□□□□□ -1.43
Sftpa1P35242 Gm8256-203ENSMUST00000228692 591 ntBASIC6.11□□□□□ -1.43
Sftpa1P35242 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Sftpa1P35242 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sftpa1P35242 Gm44021-201ENSMUST00000203055 3516 ntBASIC6.11□□□□□ -1.43
Sftpa1P35242 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sftpa1P35242 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.11□□□□□ -1.43
Sftpa1P35242 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.11□□□□□ -1.43
Sftpa1P35242 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC6.11□□□□□ -1.43
Sftpa1P35242 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Sftpa1P35242 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sftpa1P35242 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sftpa1P35242 Gm37783-201ENSMUST00000192025 1856 ntBASIC6.11□□□□□ -1.43
Sftpa1P35242 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sftpa1P35242 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC6.11□□□□□ -1.43
Sftpa1P35242 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.11□□□□□ -1.43
Sftpa1P35242 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Sftpa1P35242 Dennd6a-203ENSMUST00000224111 2692 ntBASIC6.11□□□□□ -1.43
Sftpa1P35242 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sftpa1P35242 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.1□□□□□ -1.43
Sftpa1P35242 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.1□□□□□ -1.43
Sftpa1P35242 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sftpa1P35242 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sftpa1P35242 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.1□□□□□ -1.43
Sftpa1P35242 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sftpa1P35242 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sftpa1P35242 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm37735-201ENSMUST00000193995 1406 ntBASIC6.1□□□□□ -1.43
Sftpa1P35242 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sftpa1P35242 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Sftpa1P35242 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm8872-201ENSMUST00000197475 1341 ntBASIC6.1□□□□□ -1.43
Sftpa1P35242 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sftpa1P35242 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm25917-201ENSMUST00000104267 130 ntBASIC6.1□□□□□ -1.43
Sftpa1P35242 Mir466j-201ENSMUST00000116876 122 ntBASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm6181-201ENSMUST00000117187 264 ntBASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm15048-201ENSMUST00000118201 954 ntBASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm23740-201ENSMUST00000157385 100 ntBASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm16164-201ENSMUST00000160078 468 ntBASIC6.1□□□□□ -1.43
Sftpa1P35242 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm22132-201ENSMUST00000175316 100 ntBASIC6.1□□□□□ -1.43
Sftpa1P35242 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.1□□□□□ -1.43
Sftpa1P35242 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sftpa1P35242 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC6.1□□□□□ -1.43
Sftpa1P35242 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sftpa1P35242 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm37187-201ENSMUST00000193425 341 ntBASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm5853-201ENSMUST00000197183 632 ntBASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm44265-201ENSMUST00000203631 465 ntBASIC6.1□□□□□ -1.43
Sftpa1P35242 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm4510-201ENSMUST00000218265 427 ntBASIC6.1□□□□□ -1.43
Sftpa1P35242 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.1□□□□□ -1.43
Sftpa1P35242 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.1□□□□□ -1.43
Sftpa1P35242 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.1□□□□□ -1.43
Sftpa1P35242 AC156016.2-201ENSMUST00000228200 525 ntBASIC6.1□□□□□ -1.43
Sftpa1P35242 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sftpa1P35242 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sftpa1P35242 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm26163-201ENSMUST00000083792 178 ntBASIC6.1□□□□□ -1.43
Sftpa1P35242 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sftpa1P35242 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm43982-201ENSMUST00000204995 1829 ntBASIC6.1□□□□□ -1.43
Sftpa1P35242 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sftpa1P35242 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sftpa1P35242 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sftpa1P35242 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Sftpa1P35242 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sftpa1P35242 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sftpa1P35242 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.09□□□□□ -1.43
Sftpa1P35242 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sftpa1P35242 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 124.7 ms