Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
Hoxc11P31313 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.55□□□□□ -1.36
Hoxc11P31313 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxc11P31313 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxc11P31313 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.55□□□□□ -1.36
Hoxc11P31313 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.55□□□□□ -1.36
Hoxc11P31313 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.55□□□□□ -1.36
Hoxc11P31313 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Hoxc11P31313 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.55□□□□□ -1.36
Hoxc11P31313 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Hoxc11P31313 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxc11P31313 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Hoxc11P31313 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Hoxc11P31313 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.54□□□□□ -1.36
Hoxc11P31313 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxc11P31313 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
Hoxc11P31313 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm43062-201ENSMUST00000196302 1319 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
Hoxc11P31313 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Hoxc11P31313 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxc11P31313 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Hoxc11P31313 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxc11P31313 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxc11P31313 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Hoxc11P31313 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm15216-201ENSMUST00000118058 277 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm15349-201ENSMUST00000121154 204 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm12222-201ENSMUST00000121368 260 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm13237-201ENSMUST00000122151 635 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.54□□□□□ -1.36
Hoxc11P31313 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxc11P31313 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxc11P31313 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm24176-201ENSMUST00000158928 121 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 Mir5617-201ENSMUST00000176786 57 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm28060-201ENSMUST00000191554 189 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm38068-201ENSMUST00000192546 540 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm7804-202ENSMUST00000194187 854 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm19104-201ENSMUST00000198392 679 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxc11P31313 Ighv1-83-201ENSMUST00000199643 351 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm43141-201ENSMUST00000199695 274 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.54□□□□□ -1.36
Hoxc11P31313 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC6.54□□□□□ -1.36
Hoxc11P31313 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC6.54□□□□□ -1.36
Hoxc11P31313 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm9231-201ENSMUST00000220817 1009 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxc11P31313 Gm9315-201ENSMUST00000222696 908 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Hoxc11P31313 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.54□□□□□ -1.36
Hoxc11P31313 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxc11P31313 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Hoxc11P31313 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Hoxc11P31313 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Hoxc11P31313 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
Hoxc11P31313 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC6.53□□□□□ -1.36
Hoxc11P31313 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.53□□□□□ -1.36
Hoxc11P31313 Mir674-201ENSMUST00000102421 100 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Hoxc11P31313 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm649-201ENSMUST00000117284 1054 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm12242-201ENSMUST00000118824 738 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm14796-201ENSMUST00000121216 959 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm12540-201ENSMUST00000121938 319 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm22223-201ENSMUST00000157360 125 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm25660-201ENSMUST00000158470 104 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm3344-201ENSMUST00000169610 603 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm20454-201ENSMUST00000172713 221 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm29470-201ENSMUST00000188007 696 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm28846-201ENSMUST00000189161 368 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm21301-201ENSMUST00000189476 699 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms