Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3cP02301 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.6□□□□□ -1.51
H3f3cP02301 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3cP02301 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3cP02301 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.6□□□□□ -1.51
H3f3cP02301 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3cP02301 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3cP02301 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC5.6□□□□□ -1.51
H3f3cP02301 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3cP02301 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3cP02301 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.59□□□□□ -1.51
H3f3cP02301 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
H3f3cP02301 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3cP02301 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC5.59□□□□□ -1.51
H3f3cP02301 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
H3f3cP02301 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
H3f3cP02301 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
H3f3cP02301 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
H3f3cP02301 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3cP02301 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3cP02301 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3cP02301 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3cP02301 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3cP02301 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
H3f3cP02301 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC5.59□□□□□ -1.51
H3f3cP02301 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
H3f3cP02301 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3cP02301 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3cP02301 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
H3f3cP02301 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3cP02301 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3cP02301 Gm16073-201ENSMUST00000116032 517 ntBASIC5.59□□□□□ -1.51
H3f3cP02301 Gm15216-201ENSMUST00000118058 277 ntBASIC5.59□□□□□ -1.51
H3f3cP02301 Gm4914-201ENSMUST00000119757 459 ntBASIC5.59□□□□□ -1.51
H3f3cP02301 Gm14457-201ENSMUST00000148069 1161 ntBASIC5.59□□□□□ -1.51
H3f3cP02301 Gm16297-201ENSMUST00000161466 459 ntBASIC5.59□□□□□ -1.51
H3f3cP02301 Gm38068-201ENSMUST00000192546 540 ntBASIC5.59□□□□□ -1.51
H3f3cP02301 Gm37439-201ENSMUST00000193150 856 ntBASIC5.59□□□□□ -1.51
H3f3cP02301 Gm43383-201ENSMUST00000195981 469 ntBASIC5.59□□□□□ -1.51
H3f3cP02301 Gm43063-201ENSMUST00000198198 1081 ntBASIC5.59□□□□□ -1.51
H3f3cP02301 Gm43203-201ENSMUST00000200130 558 ntBASIC5.59□□□□□ -1.51
H3f3cP02301 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC5.59□□□□□ -1.51
H3f3cP02301 Gm44856-201ENSMUST00000206639 304 ntBASIC5.59□□□□□ -1.51
H3f3cP02301 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC5.59□□□□□ -1.51
H3f3cP02301 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.59□□□□□ -1.51
H3f3cP02301 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
H3f3cP02301 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
H3f3cP02301 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
H3f3cP02301 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
H3f3cP02301 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3cP02301 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3cP02301 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3cP02301 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3cP02301 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
H3f3cP02301 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
H3f3cP02301 AC167013.5-201ENSMUST00000227597 2947 ntBASIC5.59□□□□□ -1.51
H3f3cP02301 Gm37278-201ENSMUST00000191619 2872 ntBASIC5.59□□□□□ -1.51
H3f3cP02301 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
H3f3cP02301 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
H3f3cP02301 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
H3f3cP02301 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
H3f3cP02301 Gm37755-201ENSMUST00000195880 2179 ntBASIC5.59□□□□□ -1.52
H3f3cP02301 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.52
H3f3cP02301 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
H3f3cP02301 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.59□□□□□ -1.52
H3f3cP02301 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
H3f3cP02301 Gm42994-201ENSMUST00000195964 2549 ntBASIC5.58□□□□□ -1.52
H3f3cP02301 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
H3f3cP02301 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
H3f3cP02301 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
H3f3cP02301 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC5.58□□□□□ -1.52
H3f3cP02301 Gm44843-201ENSMUST00000208320 1396 ntBASIC5.58□□□□□ -1.52
H3f3cP02301 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
H3f3cP02301 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC5.58□□□□□ -1.52
H3f3cP02301 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
H3f3cP02301 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
H3f3cP02301 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC5.58□□□□□ -1.52
H3f3cP02301 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
H3f3cP02301 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC5.58□□□□□ -1.52
H3f3cP02301 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
H3f3cP02301 Gm24173-201ENSMUST00000104130 128 ntBASIC5.58□□□□□ -1.52
H3f3cP02301 Gm25877-201ENSMUST00000104326 129 ntBASIC5.58□□□□□ -1.52
H3f3cP02301 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC5.58□□□□□ -1.52
H3f3cP02301 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
H3f3cP02301 Gm9064-201ENSMUST00000163579 566 ntBASIC5.58□□□□□ -1.52
H3f3cP02301 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.58□□□□□ -1.52
H3f3cP02301 Gm3585-201ENSMUST00000173438 875 ntBASIC5.58□□□□□ -1.52
H3f3cP02301 Gm23968-201ENSMUST00000175047 125 ntBASIC5.58□□□□□ -1.52
H3f3cP02301 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC5.58□□□□□ -1.52
H3f3cP02301 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC5.58□□□□□ -1.52
H3f3cP02301 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
H3f3cP02301 Gm29160-201ENSMUST00000190094 699 ntBASIC5.58□□□□□ -1.52
H3f3cP02301 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
H3f3cP02301 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
H3f3cP02301 Gm20128-201ENSMUST00000196189 417 ntBASIC5.58□□□□□ -1.52
H3f3cP02301 Gm43576-201ENSMUST00000197937 871 ntBASIC5.58□□□□□ -1.52
H3f3cP02301 AC151967.1-201ENSMUST00000198146 76 ntBASIC5.58□□□□□ -1.52
H3f3cP02301 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
H3f3cP02301 Gm8190-201ENSMUST00000199603 586 ntBASIC5.58□□□□□ -1.52
H3f3cP02301 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms