Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hcn3O88705 Gm26146-201ENSMUST00000104478 185 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 Gm17184-201ENSMUST00000111864 462 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.39□□□□□ -1.39
Hcn3O88705 Gm22710-201ENSMUST00000116892 125 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 Gm15484-201ENSMUST00000118871 828 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 Gm11485-201ENSMUST00000120048 1175 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hcn3O88705 Mir1981-201ENSMUST00000157934 82 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 Gm7418-201ENSMUST00000162120 801 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 Gm44370-201ENSMUST00000175436 112 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 Gm27401-201ENSMUST00000184052 173 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC6.39□□□□□ -1.39
Hcn3O88705 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.39□□□□□ -1.39
Hcn3O88705 Gm28114-201ENSMUST00000187232 379 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hcn3O88705 Gm18350-201ENSMUST00000187395 955 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 Gm37604-201ENSMUST00000191749 1272 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 Gm18747-201ENSMUST00000198129 648 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Hcn3O88705 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.39□□□□□ -1.39
Hcn3O88705 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC6.39□□□□□ -1.39
Hcn3O88705 Gm18655-201ENSMUST00000214802 1090 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 Gm6667-201ENSMUST00000217169 564 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 AC151971.2-201ENSMUST00000217540 909 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC6.39□□□□□ -1.39
Hcn3O88705 AC123534.1-201ENSMUST00000224060 656 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 CT025525.1-201ENSMUST00000226325 1054 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hcn3O88705 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Hcn3O88705 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Hcn3O88705 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Hcn3O88705 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC6.39□□□□□ -1.39
Hcn3O88705 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hcn3O88705 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hcn3O88705 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hcn3O88705 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hcn3O88705 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Hcn3O88705 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.39□□□□□ -1.39
Hcn3O88705 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hcn3O88705 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hcn3O88705 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.39□□□□□ -1.39
Hcn3O88705 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hcn3O88705 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Hcn3O88705 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Hcn3O88705 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Hcn3O88705 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hcn3O88705 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
Hcn3O88705 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hcn3O88705 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hcn3O88705 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Hcn3O88705 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hcn3O88705 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.38□□□□□ -1.39
Hcn3O88705 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hcn3O88705 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hcn3O88705 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hcn3O88705 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hcn3O88705 Gm25546-201ENSMUST00000103977 132 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Gm26016-201ENSMUST00000104403 129 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hcn3O88705 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC6.38□□□□□ -1.39
Hcn3O88705 Gm14836-201ENSMUST00000118567 471 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Gm22025-201ENSMUST00000122734 302 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hcn3O88705 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Hcn3O88705 Gm23467-201ENSMUST00000157127 159 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Gm25722-201ENSMUST00000157498 279 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Gm16571-201ENSMUST00000159112 291 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.38□□□□□ -1.39
Hcn3O88705 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hcn3O88705 Gm18501-201ENSMUST00000185363 664 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Gm28958-201ENSMUST00000185864 703 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.38□□□□□ -1.39
Hcn3O88705 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Gm37072-201ENSMUST00000194570 837 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC6.38□□□□□ -1.39
Hcn3O88705 AC127224.1-201ENSMUST00000218094 453 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Gm17917-201ENSMUST00000218561 953 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Gm32899-201ENSMUST00000219694 207 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC6.38□□□□□ -1.39
Hcn3O88705 AC164436.1-201ENSMUST00000227074 772 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hcn3O88705 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hcn3O88705 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hcn3O88705 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hcn3O88705 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hcn3O88705 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hcn3O88705 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.38□□□□□ -1.39
Hcn3O88705 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Hcn3O88705 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.38□□□□□ -1.39
Hcn3O88705 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms