Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC5.2□□□□□ -1.58
Hmgb3O54879 AC107453.3-201ENSMUST00000228205 639 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Hmgb3O54879 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Hmgb3O54879 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Hmgb3O54879 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Hmgb3O54879 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
Hmgb3O54879 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Hmgb3O54879 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Hmgb3O54879 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Hmgb3O54879 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Hmgb3O54879 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Hmgb3O54879 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm22781-201ENSMUST00000104083 137 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm26417-201ENSMUST00000104274 135 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm24986-201ENSMUST00000104452 132 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm12874-201ENSMUST00000117190 913 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm8421-201ENSMUST00000119439 305 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm12331-201ENSMUST00000119927 622 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm13740-201ENSMUST00000120590 310 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm5135-201ENSMUST00000121100 573 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm11383-201ENSMUST00000121346 807 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm14038-201ENSMUST00000121500 807 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm15242-201ENSMUST00000122459 283 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm8089-201ENSMUST00000122463 968 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC5.19□□□□□ -1.58
Hmgb3O54879 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm17786-201ENSMUST00000182000 427 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Mir7685-201ENSMUST00000183555 62 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm27684-201ENSMUST00000183778 80 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.19□□□□□ -1.58
Hmgb3O54879 Txn-ps1-201ENSMUST00000186385 309 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm37511-201ENSMUST00000192901 294 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm20926-201ENSMUST00000194457 696 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC5.19□□□□□ -1.58
Hmgb3O54879 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm43812-202ENSMUST00000202701 581 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm4548-201ENSMUST00000208487 509 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm8804-201ENSMUST00000212292 798 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm18601-201ENSMUST00000220831 634 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 AC154487.1-201ENSMUST00000224649 226 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 AC116319.2-201ENSMUST00000228159 984 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Hmgb3O54879 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Hmgb3O54879 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Hmgb3O54879 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Hmgb3O54879 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 AC122828.2-201ENSMUST00000222511 2880 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Hmgb3O54879 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Hmgb3O54879 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Hmgb3O54879 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Hmgb3O54879 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Hmgb3O54879 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.19□□□□□ -1.58
Hmgb3O54879 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Hmgb3O54879 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hmgb3O54879 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Hmgb3O54879 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Hmgb3O54879 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.18□□□□□ -1.58
Hmgb3O54879 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Hmgb3O54879 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.18□□□□□ -1.58
Hmgb3O54879 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.18□□□□□ -1.58
Hmgb3O54879 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Hmgb3O54879 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Hmgb3O54879 Gm23437-201ENSMUST00000104036 127 ntBASIC5.18□□□□□ -1.58
Hmgb3O54879 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Hmgb3O54879 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Hmgb3O54879 Gm11295-201ENSMUST00000121379 803 ntBASIC5.18□□□□□ -1.58
Hmgb3O54879 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC5.18□□□□□ -1.58
Hmgb3O54879 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC5.18□□□□□ -1.58
Hmgb3O54879 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Hmgb3O54879 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Hmgb3O54879 Gm23497-201ENSMUST00000157738 130 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms