Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm22707-201ENSMUST00000103834 110 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm12635-201ENSMUST00000117285 752 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm13940-201ENSMUST00000121023 301 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm15538-201ENSMUST00000121410 313 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm14380-201ENSMUST00000122298 431 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm15187-201ENSMUST00000122329 264 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm14990-201ENSMUST00000122354 445 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm12591-201ENSMUST00000122407 1177 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm23884-201ENSMUST00000122687 294 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm22985-201ENSMUST00000122754 116 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm3611-201ENSMUST00000173687 877 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm24561-201ENSMUST00000175182 95 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Mir3078-201ENSMUST00000175231 87 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm26528-201ENSMUST00000181965 283 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm27158-201ENSMUST00000183813 238 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm36966-201ENSMUST00000192217 413 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm8861-201ENSMUST00000196346 832 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Ighv1-73-201ENSMUST00000197435 352 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 AC151901.1-201ENSMUST00000218274 180 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 AC124510.2-201ENSMUST00000221958 683 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 AC134864.1-201ENSMUST00000226326 511 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Diaph3-206ENSMUST00000226745 713 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 AC131100.2-201ENSMUST00000227701 998 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.82□□□□□ -1.32
Clip3B9EHT4 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clip3B9EHT4 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clip3B9EHT4 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clip3B9EHT4 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clip3B9EHT4 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clip3B9EHT4 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clip3B9EHT4 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.81□□□□□ -1.32
Clip3B9EHT4 Gm40778-201ENSMUST00000217825 1344 ntBASIC6.81□□□□□ -1.32
Clip3B9EHT4 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clip3B9EHT4 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clip3B9EHT4 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clip3B9EHT4 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Clip3B9EHT4 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC6.81□□□□□ -1.32
Clip3B9EHT4 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
Clip3B9EHT4 Gm42645-201ENSMUST00000201573 1627 ntBASIC6.81□□□□□ -1.32
Clip3B9EHT4 Mir466f-2-201ENSMUST00000104805 94 ntBASIC6.81□□□□□ -1.32
Clip3B9EHT4 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms