Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Gm10688-201ENSMUST00000214985 520 ntBASIC7.17□□□□□ -1.26
Scn3aA2ASI5 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Gm43581-201ENSMUST00000196766 2864 ntBASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 AC022775.1-201ENSMUST00000228163 2698 ntBASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Gm7048-201ENSMUST00000199395 1891 ntBASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Gm42462-201ENSMUST00000196543 1363 ntBASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Gm14712-201ENSMUST00000120195 772 ntBASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Gm17366-201ENSMUST00000167629 187 ntBASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Gm29509-201ENSMUST00000185716 321 ntBASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC7.17□□□□□ -1.26
Scn3aA2ASI5 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Gm25133-201ENSMUST00000082647 130 ntBASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Scn3aA2ASI5 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Gm23739-201ENSMUST00000102295 108 ntBASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Gm12874-201ENSMUST00000117190 913 ntBASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Gm14098-201ENSMUST00000119295 623 ntBASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Gm5387-201ENSMUST00000119776 857 ntBASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Gm22210-201ENSMUST00000158101 144 ntBASIC7.16□□□□□ -1.26
Scn3aA2ASI5 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Gm36262-201ENSMUST00000223274 499 ntBASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Gm5341-201ENSMUST00000058881 489 ntBASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Gm10221-201ENSMUST00000088299 309 ntBASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Gm18878-201ENSMUST00000223071 1443 ntBASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Gm44215-201ENSMUST00000204910 2711 ntBASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 AC164978.1-201ENSMUST00000228608 4011 ntBASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 CT009480.2-201ENSMUST00000225152 3369 ntBASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Scn3aA2ASI5 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Scn3aA2ASI5 AC139941.2-201ENSMUST00000221565 1824 ntBASIC7.15□□□□□ -1.26
Scn3aA2ASI5 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC7.15□□□□□ -1.26
Scn3aA2ASI5 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Scn3aA2ASI5 Gm12396-201ENSMUST00000121600 306 ntBASIC7.15□□□□□ -1.26
Scn3aA2ASI5 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC7.15□□□□□ -1.26
Scn3aA2ASI5 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC7.15□□□□□ -1.26
Scn3aA2ASI5 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Scn3aA2ASI5 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC7.15□□□□□ -1.26
Scn3aA2ASI5 Gm17847-201ENSMUST00000188261 1127 ntBASIC7.15□□□□□ -1.26
Scn3aA2ASI5 Gm44239-201ENSMUST00000204228 271 ntBASIC7.15□□□□□ -1.26
Scn3aA2ASI5 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Scn3aA2ASI5 AC122371.2-201ENSMUST00000220583 366 ntBASIC7.15□□□□□ -1.26
Scn3aA2ASI5 AC163743.1-201ENSMUST00000224309 270 ntBASIC7.15□□□□□ -1.26
Scn3aA2ASI5 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Scn3aA2ASI5 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Scn3aA2ASI5 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Scn3aA2ASI5 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC7.15□□□□□ -1.26
Scn3aA2ASI5 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC7.15□□□□□ -1.26
Scn3aA2ASI5 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms