Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 AC122828.2-201ENSMUST00000222511 2880 ntBASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm23748-201ENSMUST00000104227 131 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm12468-201ENSMUST00000116189 404 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm7821-201ENSMUST00000117111 788 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm12874-201ENSMUST00000117190 913 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm15153-201ENSMUST00000119867 274 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm13338-201ENSMUST00000120235 361 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm14038-201ENSMUST00000121500 807 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm25057-201ENSMUST00000157366 88 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm22523-201ENSMUST00000158696 100 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm9274-201ENSMUST00000182505 984 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm44342-201ENSMUST00000196874 129 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm8454-201ENSMUST00000196980 811 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm44383-201ENSMUST00000198940 129 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm4548-201ENSMUST00000208487 509 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm2398-201ENSMUST00000218347 883 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Gm7252-201ENSMUST00000223284 456 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.34□□□□□ -1.39
Lima1Q9ERG0 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Lima1Q9ERG0 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Lima1Q9ERG0 Gm11590-201ENSMUST00000118999 1455 ntBASIC6.34□□□□□ -1.4
Lima1Q9ERG0 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Lima1Q9ERG0 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.34□□□□□ -1.4
Lima1Q9ERG0 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Lima1Q9ERG0 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Mir674-201ENSMUST00000102421 100 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gm15048-201ENSMUST00000118201 954 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gm13735-201ENSMUST00000120217 670 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gm22235-201ENSMUST00000157085 110 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gm22820-201ENSMUST00000157205 329 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gm23810-201ENSMUST00000175150 74 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gm20615-201ENSMUST00000177503 705 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.33□□□□□ -1.4
Lima1Q9ERG0 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gm38291-201ENSMUST00000193671 259 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Igkv4-77-201ENSMUST00000199410 352 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gm5027-201ENSMUST00000206700 375 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gm2225-201ENSMUST00000209570 377 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gm9685-201ENSMUST00000211275 538 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gm18226-201ENSMUST00000215261 521 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 AC124184.1-201ENSMUST00000218167 283 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.33□□□□□ -1.4
Lima1Q9ERG0 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms