Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm38081-201ENSMUST00000192680 1645 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Amy2b-201ENSMUST00000120184 1577 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm43612-201ENSMUST00000196087 3207 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm42613-201ENSMUST00000199975 1931 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm42975-201ENSMUST00000200612 1491 ntBASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Gm45073-201ENSMUST00000207688 4247 ntBASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Gm14772-201ENSMUST00000116562 514 ntBASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Gm15349-201ENSMUST00000121154 204 ntBASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Gm22428-201ENSMUST00000158554 132 ntBASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Gm4373-201ENSMUST00000178571 556 ntBASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Gm4956-202ENSMUST00000178869 672 ntBASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Ighv1-14-201ENSMUST00000194015 402 ntBASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 AC164295.1-201ENSMUST00000224861 186 ntBASIC7.36□□□□□ -1.23
Smc1aQ9CU62 AC105324.1-201ENSMUST00000227844 386 ntBASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Snora21-201ENSMUST00000082967 137 ntBASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 AC159006.2-201ENSMUST00000228734 4144 ntBASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Smc1aQ9CU62 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Gm25785-201ENSMUST00000104129 125 ntBASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Gm14893-201ENSMUST00000117904 282 ntBASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Gm15216-201ENSMUST00000118058 277 ntBASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Gm14466-201ENSMUST00000119028 451 ntBASIC7.35□□□□□ -1.23
Smc1aQ9CU62 n-R5s48-201ENSMUST00000122482 110 ntBASIC7.35□□□□□ -1.23
Smc1aQ9CU62 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Mir5617-201ENSMUST00000176786 57 ntBASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Gm19087-201ENSMUST00000191430 946 ntBASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Gm37285-201ENSMUST00000194465 1139 ntBASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Gm42580-201ENSMUST00000197223 753 ntBASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Gm9367-201ENSMUST00000205703 546 ntBASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Gm19324-201ENSMUST00000213229 1169 ntBASIC7.35□□□□□ -1.23
Smc1aQ9CU62 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 AC124601.1-201ENSMUST00000220531 135 ntBASIC7.35□□□□□ -1.23
Smc1aQ9CU62 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Gm24405-201ENSMUST00000083033 167 ntBASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Smc1aQ9CU62 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 119.8 ms