Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm12874-201ENSMUST00000117190 913 ntBASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm13983-201ENSMUST00000118018 865 ntBASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm15621-201ENSMUST00000119162 364 ntBASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm14728-201ENSMUST00000122196 492 ntBASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.12□□□□□ -1.43
Use1Q9CQ56 Mir7115-201ENSMUST00000184275 64 ntBASIC6.12□□□□□ -1.43
Use1Q9CQ56 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.12□□□□□ -1.43
Use1Q9CQ56 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm42696-201ENSMUST00000199859 1142 ntBASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm5314-201ENSMUST00000204852 466 ntBASIC6.12□□□□□ -1.43
Use1Q9CQ56 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC6.12□□□□□ -1.43
Use1Q9CQ56 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Use1Q9CQ56 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm8275-201ENSMUST00000219732 424 ntBASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm18591-201ENSMUST00000220568 763 ntBASIC6.12□□□□□ -1.43
Use1Q9CQ56 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.12□□□□□ -1.43
Use1Q9CQ56 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.12□□□□□ -1.43
Use1Q9CQ56 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.12□□□□□ -1.43
Use1Q9CQ56 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.12□□□□□ -1.43
Use1Q9CQ56 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.12□□□□□ -1.43
Use1Q9CQ56 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.12□□□□□ -1.43
Use1Q9CQ56 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.12□□□□□ -1.43
Use1Q9CQ56 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.12□□□□□ -1.43
Use1Q9CQ56 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Gm14886-201ENSMUST00000117208 2629 ntBASIC6.12□□□□□ -1.43
Use1Q9CQ56 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Use1Q9CQ56 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Use1Q9CQ56 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gm22710-201ENSMUST00000116892 125 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gm13423-201ENSMUST00000117205 888 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gm14513-201ENSMUST00000117403 123 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gm15715-201ENSMUST00000118032 283 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gm13679-201ENSMUST00000118678 484 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gm14614-201ENSMUST00000119873 384 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gm23810-201ENSMUST00000175150 74 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gm28620-201ENSMUST00000190463 439 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gm38291-201ENSMUST00000193671 259 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 Ighv8-15-201ENSMUST00000197770 294 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC6.11□□□□□ -1.43
Use1Q9CQ56 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 AC153847.1-201ENSMUST00000214524 353 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC6.11□□□□□ -1.43
Use1Q9CQ56 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.11□□□□□ -1.43
Use1Q9CQ56 CT009495.1-201ENSMUST00000224221 862 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Use1Q9CQ56 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms