Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Gm42881-201ENSMUST00000198636 3344 ntBASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Krt88Q9CPR6 Gm37100-201ENSMUST00000193344 1353 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm23437-201ENSMUST00000104036 127 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm12937-201ENSMUST00000118333 448 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm13744-201ENSMUST00000118953 850 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm15621-201ENSMUST00000119162 364 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm11925-201ENSMUST00000121375 535 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Mir1903-201ENSMUST00000122574 80 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm7651-201ENSMUST00000173398 901 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm22702-201ENSMUST00000175372 69 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm9556-201ENSMUST00000182938 940 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Ighv8-15-201ENSMUST00000197770 294 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm44590-201ENSMUST00000206161 391 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm6070-201ENSMUST00000207275 419 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm45246-201ENSMUST00000210820 367 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm2996-201ENSMUST00000211398 537 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm35619-201ENSMUST00000222548 600 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 AC113125.2-201ENSMUST00000226837 362 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Krt88Q9CPR6 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm43176-201ENSMUST00000199653 2989 ntBASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm25593-201ENSMUST00000102272 96 ntBASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm11864-201ENSMUST00000116179 1220 ntBASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm11903-201ENSMUST00000118958 727 ntBASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm11653-201ENSMUST00000119992 1009 ntBASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm11726-201ENSMUST00000121028 424 ntBASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm11962-201ENSMUST00000145746 255 ntBASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm23077-201ENSMUST00000157854 116 ntBASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm19815-201ENSMUST00000175818 335 ntBASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm17786-201ENSMUST00000182000 427 ntBASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm27866-201ENSMUST00000184459 171 ntBASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.79□□□□□ -1.48
Krt88Q9CPR6 Gm7463-201ENSMUST00000201541 547 ntBASIC5.79□□□□□ -1.48
Krt88Q9CPR6 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms