Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Gm23739-201ENSMUST00000102295 108 ntBASIC6.65□□□□□ -1.34
Cstf1Q99LC2 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Gm13702-201ENSMUST00000118542 825 ntBASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Gm14202-201ENSMUST00000120121 311 ntBASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Gm24719-201ENSMUST00000157520 110 ntBASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Gm26162-201ENSMUST00000157793 132 ntBASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Mir3097-201ENSMUST00000175356 67 ntBASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Gm7952-201ENSMUST00000180540 984 ntBASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Zfp572-202ENSMUST00000184208 1078 ntBASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Gm18409-202ENSMUST00000220105 529 ntBASIC6.65□□□□□ -1.34
Cstf1Q99LC2 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Cstf1Q99LC2 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.65□□□□□ -1.34
Cstf1Q99LC2 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Cstf1Q99LC2 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Cstf1Q99LC2 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Cstf1Q99LC2 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Cstf1Q99LC2 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Cstf1Q99LC2 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Cstf1Q99LC2 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Cstf1Q99LC2 Cmah-208ENSMUST00000224819 9482 ntBASIC6.65□□□□□ -1.35
Cstf1Q99LC2 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Cstf1Q99LC2 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Cstf1Q99LC2 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Cstf1Q99LC2 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Cstf1Q99LC2 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.65□□□□□ -1.35
Cstf1Q99LC2 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.65□□□□□ -1.35
Cstf1Q99LC2 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.65□□□□□ -1.35
Cstf1Q99LC2 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Cstf1Q99LC2 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Cstf1Q99LC2 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm6558-201ENSMUST00000191934 1973 ntBASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm22371-201ENSMUST00000104588 130 ntBASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm23539-201ENSMUST00000157537 224 ntBASIC6.64□□□□□ -1.35
Cstf1Q99LC2 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm27018-201ENSMUST00000181136 225 ntBASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Mir6361-201ENSMUST00000185079 101 ntBASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm18700-201ENSMUST00000185791 553 ntBASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Ighv1-44-201ENSMUST00000195597 352 ntBASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm5717-201ENSMUST00000198243 1062 ntBASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm18103-201ENSMUST00000216621 779 ntBASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm46364-201ENSMUST00000218548 319 ntBASIC6.64□□□□□ -1.35
Cstf1Q99LC2 AC211878.6-201ENSMUST00000221896 358 ntBASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm33312-201ENSMUST00000222443 332 ntBASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.64□□□□□ -1.35
Cstf1Q99LC2 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms