Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Ccdc28aQ8CEI3 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ccdc28aQ8CEI3 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.71□□□□□ -1.33
Ccdc28aQ8CEI3 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ccdc28aQ8CEI3 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ccdc28aQ8CEI3 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Ccdc28aQ8CEI3 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Gm8624-201ENSMUST00000118083 432 ntBASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Gm23954-201ENSMUST00000157213 353 ntBASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Gm23259-201ENSMUST00000158318 303 ntBASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Gm23632-201ENSMUST00000175289 125 ntBASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Gm5300-201ENSMUST00000182201 1003 ntBASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Gm37477-201ENSMUST00000195215 884 ntBASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Gm42782-201ENSMUST00000197286 522 ntBASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Gm45888-201ENSMUST00000212348 1229 ntBASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Gm37902-201ENSMUST00000192839 1683 ntBASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.71□□□□□ -1.34
Ccdc28aQ8CEI3 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Gm13357-201ENSMUST00000120528 537 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Gm13877-201ENSMUST00000120614 417 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Gm13642-201ENSMUST00000121697 381 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Gm24545-201ENSMUST00000158651 85 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Gm4308-201ENSMUST00000179735 914 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Mir7685-201ENSMUST00000183555 62 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Gm29759-201ENSMUST00000205860 327 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Ccdc28aQ8CEI3 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc28aQ8CEI3 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Ccdc28aQ8CEI3 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Ccdc28aQ8CEI3 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Ccdc28aQ8CEI3 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc28aQ8CEI3 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms