Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 AC124516.2-201ENSMUST00000221455 1829 ntBASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm23748-201ENSMUST00000104227 131 ntBASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm15105-201ENSMUST00000117777 204 ntBASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm14630-201ENSMUST00000118057 246 ntBASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm15621-201ENSMUST00000119162 364 ntBASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm14048-201ENSMUST00000121864 1268 ntBASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm15242-201ENSMUST00000122459 283 ntBASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm3760-201ENSMUST00000167475 804 ntBASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 AC160112.1-201ENSMUST00000219139 714 ntBASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 CT009546.3-201ENSMUST00000220914 208 ntBASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm35619-201ENSMUST00000222548 600 ntBASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 AC124715.1-201ENSMUST00000228480 754 ntBASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm9788-201ENSMUST00000057038 906 ntBASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm21731-201ENSMUST00000079524 489 ntBASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 AC105407.2-201ENSMUST00000223707 3911 ntBASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.38□□□□□ -1.39
Ccdc28bQ8CEG5 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Mir503-201ENSMUST00000102168 71 ntBASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Gm12361-201ENSMUST00000119806 1044 ntBASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Gm11259-201ENSMUST00000120554 715 ntBASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Gm13740-201ENSMUST00000120590 310 ntBASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Gm17786-201ENSMUST00000182000 427 ntBASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Gm6472-202ENSMUST00000187973 582 ntBASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Gm18593-201ENSMUST00000200754 1139 ntBASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Gm44590-201ENSMUST00000206161 391 ntBASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Gm45509-201ENSMUST00000209624 1229 ntBASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.37□□□□□ -1.39
Ccdc28bQ8CEG5 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms