Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.63□□□□□ -1.35
Trub1Q8C0D0 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Gm4556-201ENSMUST00000217808 355 ntBASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Gm46364-201ENSMUST00000218548 319 ntBASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Gm19340-201ENSMUST00000221995 345 ntBASIC6.63□□□□□ -1.35
Trub1Q8C0D0 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 AC102676.1-201ENSMUST00000228131 719 ntBASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Trub1Q8C0D0 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.62□□□□□ -1.35
Trub1Q8C0D0 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Gm12040-201ENSMUST00000118357 537 ntBASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Gm13357-201ENSMUST00000120528 537 ntBASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Gm23884-201ENSMUST00000122687 294 ntBASIC6.62□□□□□ -1.35
Trub1Q8C0D0 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Gm20454-201ENSMUST00000172713 221 ntBASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Gm26509-201ENSMUST00000180947 948 ntBASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Gm37511-201ENSMUST00000192901 294 ntBASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Gm18628-201ENSMUST00000220584 475 ntBASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Gm9321-201ENSMUST00000221179 778 ntBASIC6.62□□□□□ -1.35
Trub1Q8C0D0 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Gm9293-201ENSMUST00000223096 306 ntBASIC6.62□□□□□ -1.35
Trub1Q8C0D0 AL837512.1-201ENSMUST00000223914 1073 ntBASIC6.62□□□□□ -1.35
Trub1Q8C0D0 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Trub1Q8C0D0 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm25785-201ENSMUST00000104129 125 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm24989-201ENSMUST00000104461 88 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm13400-201ENSMUST00000117436 380 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm14356-201ENSMUST00000118322 869 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm5793-201ENSMUST00000119393 630 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm12101-201ENSMUST00000121590 390 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm12518-201ENSMUST00000122075 779 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms