Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm22518-201ENSMUST00000158267 68 ntBASIC9.1□□□□□ -0.95
Usp47Q8BY87 Gm23386-201ENSMUST00000158585 144 ntBASIC9.1□□□□□ -0.95
Usp47Q8BY87 Gm17044-201ENSMUST00000168549 828 ntBASIC9.1□□□□□ -0.95
Usp47Q8BY87 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Usp47Q8BY87 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Usp47Q8BY87 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC9.1□□□□□ -0.95
Usp47Q8BY87 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Usp47Q8BY87 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC9.1□□□□□ -0.95
Usp47Q8BY87 Gm7626-201ENSMUST00000195801 353 ntBASIC9.1□□□□□ -0.95
Usp47Q8BY87 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC9.1□□□□□ -0.95
Usp47Q8BY87 AC073562.1-201ENSMUST00000222117 401 ntBASIC9.1□□□□□ -0.95
Usp47Q8BY87 AC154795.1-201ENSMUST00000225611 364 ntBASIC9.1□□□□□ -0.95
Usp47Q8BY87 AC122459.2-201ENSMUST00000227099 638 ntBASIC9.1□□□□□ -0.95
Usp47Q8BY87 Gm6990-201ENSMUST00000086830 348 ntBASIC9.1□□□□□ -0.95
Usp47Q8BY87 Gm44046-201ENSMUST00000203145 2678 ntBASIC9.1□□□□□ -0.95
Usp47Q8BY87 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp47Q8BY87 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Usp47Q8BY87 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC9.09□□□□□ -0.95
Usp47Q8BY87 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Usp47Q8BY87 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp47Q8BY87 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC9.09□□□□□ -0.95
Usp47Q8BY87 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp47Q8BY87 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC9.09□□□□□ -0.95
Usp47Q8BY87 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp47Q8BY87 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp47Q8BY87 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC9.09□□□□□ -0.95
Usp47Q8BY87 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp47Q8BY87 Gm38381-201ENSMUST00000193594 2275 ntBASIC9.09□□□□□ -0.95
Usp47Q8BY87 Gm38156-201ENSMUST00000194601 2260 ntBASIC9.09□□□□□ -0.95
Usp47Q8BY87 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp47Q8BY87 n-R5s16-201ENSMUST00000104555 119 ntBASIC9.09□□□□□ -0.95
Usp47Q8BY87 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp47Q8BY87 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp47Q8BY87 Gm12643-201ENSMUST00000116078 374 ntBASIC9.09□□□□□ -0.95
Usp47Q8BY87 Gm14356-201ENSMUST00000118322 869 ntBASIC9.09□□□□□ -0.95
Usp47Q8BY87 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC9.09□□□□□ -0.95
Usp47Q8BY87 Mir7072-201ENSMUST00000184542 60 ntBASIC9.09□□□□□ -0.95
Usp47Q8BY87 Gm37103-201ENSMUST00000191830 115 ntBASIC9.09□□□□□ -0.95
Usp47Q8BY87 Gm6119-201ENSMUST00000193443 1206 ntBASIC9.09□□□□□ -0.95
Usp47Q8BY87 Gm18290-201ENSMUST00000202900 844 ntBASIC9.09□□□□□ -0.95
Usp47Q8BY87 AC165292.1-201ENSMUST00000215218 620 ntBASIC9.09□□□□□ -0.95
Usp47Q8BY87 AC122371.2-201ENSMUST00000220583 366 ntBASIC9.09□□□□□ -0.95
Usp47Q8BY87 AC163743.1-201ENSMUST00000224309 270 ntBASIC9.09□□□□□ -0.95
Usp47Q8BY87 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp47Q8BY87 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC9.09□□□□□ -0.95
Usp47Q8BY87 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Usp47Q8BY87 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp47Q8BY87 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Usp47Q8BY87 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Usp47Q8BY87 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp47Q8BY87 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp47Q8BY87 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC9.08□□□□□ -0.96
Usp47Q8BY87 Gm20768-201ENSMUST00000199527 2338 ntBASIC9.08□□□□□ -0.96
Usp47Q8BY87 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usp47Q8BY87 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC9.08□□□□□ -0.96
Usp47Q8BY87 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp47Q8BY87 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp47Q8BY87 Gm44039-201ENSMUST00000204192 2246 ntBASIC9.08□□□□□ -0.96
Usp47Q8BY87 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC9.08□□□□□ -0.96
Usp47Q8BY87 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usp47Q8BY87 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp47Q8BY87 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC9.08□□□□□ -0.96
Usp47Q8BY87 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp47Q8BY87 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC9.08□□□□□ -0.96
Usp47Q8BY87 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usp47Q8BY87 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC9.08□□□□□ -0.96
Usp47Q8BY87 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Usp47Q8BY87 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Usp47Q8BY87 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC9.08□□□□□ -0.96
Usp47Q8BY87 Gm25487-201ENSMUST00000158725 125 ntBASIC9.08□□□□□ -0.96
Usp47Q8BY87 Gm20620-201ENSMUST00000177528 168 ntBASIC9.08□□□□□ -0.96
Usp47Q8BY87 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Usp47Q8BY87 Igkv4-73-201ENSMUST00000199760 358 ntBASIC9.08□□□□□ -0.96
Usp47Q8BY87 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usp47Q8BY87 Gm45473-201ENSMUST00000211452 616 ntBASIC9.08□□□□□ -0.96
Usp47Q8BY87 Gm45514-201ENSMUST00000211531 689 ntBASIC9.08□□□□□ -0.96
Usp47Q8BY87 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC9.08□□□□□ -0.96
Usp47Q8BY87 AC154646.1-201ENSMUST00000225011 1092 ntBASIC9.08□□□□□ -0.96
Usp47Q8BY87 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Usp47Q8BY87 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Usp47Q8BY87 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp47Q8BY87 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC9.08□□□□□ -0.96
Usp47Q8BY87 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC9.08□□□□□ -0.96
Usp47Q8BY87 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usp47Q8BY87 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Usp47Q8BY87 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usp47Q8BY87 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Usp47Q8BY87 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
Usp47Q8BY87 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp47Q8BY87 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp47Q8BY87 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usp47Q8BY87 Gm37347-201ENSMUST00000193969 3071 ntBASIC9.07□□□□□ -0.96
Usp47Q8BY87 AC151904.1-201ENSMUST00000219945 1498 ntBASIC9.07□□□□□ -0.96
Usp47Q8BY87 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Usp47Q8BY87 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Usp47Q8BY87 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp47Q8BY87 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp47Q8BY87 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usp47Q8BY87 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp47Q8BY87 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 112.3 ms