Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm42520-201ENSMUST00000199642 1502 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Mir683-2-201ENSMUST00000102099 109 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm13690-201ENSMUST00000118989 285 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm22214-201ENSMUST00000157563 172 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm23077-201ENSMUST00000157854 116 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm22523-201ENSMUST00000158696 100 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm24176-201ENSMUST00000158928 121 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Mir683-1-201ENSMUST00000179371 109 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Mir8114-201ENSMUST00000183582 111 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28739-201ENSMUST00000185415 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28219-201ENSMUST00000185452 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28542-201ENSMUST00000185545 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28303-201ENSMUST00000185642 747 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm29244-201ENSMUST00000185825 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm29437-201ENSMUST00000185865 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm29412-201ENSMUST00000185869 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28910-201ENSMUST00000185921 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28812-201ENSMUST00000185963 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm29468-201ENSMUST00000185978 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28335-201ENSMUST00000186204 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28854-201ENSMUST00000186218 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28636-201ENSMUST00000186353 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28452-201ENSMUST00000186623 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm29298-201ENSMUST00000186704 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28185-201ENSMUST00000186815 694 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28227-201ENSMUST00000186862 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28796-201ENSMUST00000186905 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm29659-201ENSMUST00000187063 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28473-201ENSMUST00000187325 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28558-201ENSMUST00000187373 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28682-201ENSMUST00000187430 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28738-201ENSMUST00000187480 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28949-201ENSMUST00000187805 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28773-201ENSMUST00000187925 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm29319-201ENSMUST00000188060 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm29422-201ENSMUST00000188062 694 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28734-201ENSMUST00000188104 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28787-201ENSMUST00000188357 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm29312-201ENSMUST00000188724 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm29451-201ENSMUST00000188862 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm29637-201ENSMUST00000188877 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm29033-201ENSMUST00000189114 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm29614-201ENSMUST00000189263 694 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28751-201ENSMUST00000189287 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm29559-201ENSMUST00000189412 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28272-201ENSMUST00000189512 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28483-201ENSMUST00000189519 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28123-201ENSMUST00000189725 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28368-201ENSMUST00000189804 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm29119-201ENSMUST00000189973 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28716-201ENSMUST00000190217 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm29239-201ENSMUST00000190304 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28837-201ENSMUST00000190397 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28968-201ENSMUST00000190413 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28531-201ENSMUST00000190529 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm28165-201ENSMUST00000190669 694 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm29181-201ENSMUST00000191288 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm38229-201ENSMUST00000191931 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm32347-201ENSMUST00000192944 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm37493-201ENSMUST00000193167 433 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm38121-201ENSMUST00000193213 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm38035-201ENSMUST00000194427 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm38350-201ENSMUST00000194789 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm37990-201ENSMUST00000195821 696 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm7972-201ENSMUST00000208434 1137 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 AC153847.1-201ENSMUST00000214524 353 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.87□□□□□ -1.31
Ccdc40Q8BI79 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms