Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm5946-201ENSMUST00000182340 970 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm27163-201ENSMUST00000184767 409 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm19280-201ENSMUST00000190191 205 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm37295-201ENSMUST00000192186 109 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm38281-201ENSMUST00000192301 315 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm36935-201ENSMUST00000192526 292 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm43383-201ENSMUST00000195981 469 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm43013-201ENSMUST00000198216 247 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm42646-201ENSMUST00000202233 914 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm34149-201ENSMUST00000203547 304 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm44135-201ENSMUST00000205221 368 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm4259-201ENSMUST00000206489 758 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm4972-201ENSMUST00000211108 1254 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sf3b6P59708 AL772265.1-201ENSMUST00000214379 305 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC6.52□□□□□ -1.37
Sf3b6P59708 AC069561.2-201ENSMUST00000217596 420 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm45925-202ENSMUST00000219904 1136 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm21321-201ENSMUST00000220179 446 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC6.52□□□□□ -1.37
Sf3b6P59708 CT009546.3-201ENSMUST00000220914 208 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC6.52□□□□□ -1.37
Sf3b6P59708 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sf3b6P59708 AC140393.2-201ENSMUST00000226894 943 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 AC121997.2-202ENSMUST00000227158 939 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm24150-201ENSMUST00000082759 104 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm26072-201ENSMUST00000083135 107 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm25582-201ENSMUST00000083412 110 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sf3b6P59708 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sf3b6P59708 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sf3b6P59708 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC6.51□□□□□ -1.37
Sf3b6P59708 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Sf3b6P59708 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC6.51□□□□□ -1.37
Sf3b6P59708 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
Sf3b6P59708 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Sf3b6P59708 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sf3b6P59708 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Sf3b6P59708 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sf3b6P59708 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sf3b6P59708 AC159264.1-201ENSMUST00000224844 4257 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 Gm12710-201ENSMUST00000119011 216 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 Fau-ps2-201ENSMUST00000119333 371 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 Gm5387-201ENSMUST00000119776 857 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 Gm13649-201ENSMUST00000122325 606 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 Gm13194-201ENSMUST00000142299 311 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC6.51□□□□□ -1.37
Sf3b6P59708 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sf3b6P59708 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC6.51□□□□□ -1.37
Sf3b6P59708 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sf3b6P59708 Mir1983-201ENSMUST00000157523 132 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sf3b6P59708 Gm10012-202ENSMUST00000170379 372 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Sf3b6P59708 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC6.51□□□□□ -1.37
Sf3b6P59708 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Sf3b6P59708 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Sf3b6P59708 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sf3b6P59708 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 Gm4891-201ENSMUST00000182279 912 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Sf3b6P59708 Gm8669-201ENSMUST00000183839 945 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.51□□□□□ -1.37
Sf3b6P59708 Gm5147-201ENSMUST00000185999 794 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Sf3b6P59708 Gm8307-201ENSMUST00000187682 1150 ntBASIC6.51□□□□□ -1.37
Sf3b6P59708 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 505.7 ms