Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rfx1P48377 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC8.42□□□□□ -1.06
Rfx1P48377 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rfx1P48377 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Rfx1P48377 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC8.42□□□□□ -1.06
Rfx1P48377 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rfx1P48377 Fbxw23-202ENSMUST00000198480 1388 ntBASIC8.42□□□□□ -1.06
Rfx1P48377 Gm37735-201ENSMUST00000193995 1406 ntBASIC8.42□□□□□ -1.06
Rfx1P48377 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC8.42□□□□□ -1.06
Rfx1P48377 Gm6982-201ENSMUST00000118752 1560 ntBASIC8.42□□□□□ -1.06
Rfx1P48377 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Rfx1P48377 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Rfx1P48377 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Rfx1P48377 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Rfx1P48377 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rfx1P48377 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Rfx1P48377 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Rfx1P48377 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rfx1P48377 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rfx1P48377 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC8.41□□□□□ -1.06
Rfx1P48377 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Rfx1P48377 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
Rfx1P48377 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rfx1P48377 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC8.41□□□□□ -1.06
Rfx1P48377 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Rfx1P48377 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 AC123629.1-201ENSMUST00000225669 1364 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 AC125487.2-201ENSMUST00000219810 1300 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Rfx1P48377 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Rfx1P48377 Gm25273-201ENSMUST00000104295 115 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rfx1P48377 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Rfx1P48377 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rfx1P48377 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 Gm15019-201ENSMUST00000120148 434 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC8.41□□□□□ -1.06
Rfx1P48377 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Rfx1P48377 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC8.41□□□□□ -1.06
Rfx1P48377 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Rfx1P48377 Gm7426-201ENSMUST00000179046 404 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 Gm23945-201ENSMUST00000179609 92 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rfx1P48377 Gm7481-201ENSMUST00000182020 995 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 Gm21430-201ENSMUST00000182998 998 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 Gm21181-201ENSMUST00000186249 330 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 Gm9451-201ENSMUST00000188491 604 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Rfx1P48377 Gm37392-201ENSMUST00000192098 516 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 Gm19231-201ENSMUST00000193212 830 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC8.41□□□□□ -1.06
Rfx1P48377 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC8.41□□□□□ -1.06
Rfx1P48377 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC8.41□□□□□ -1.06
Rfx1P48377 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Rfx1P48377 Gm42673-201ENSMUST00000202676 337 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 Gm44023-201ENSMUST00000203710 469 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC8.41□□□□□ -1.06
Rfx1P48377 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Rfx1P48377 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rfx1P48377 Gm9373-201ENSMUST00000208724 599 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 Gm45246-201ENSMUST00000210820 367 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 Gm45497-201ENSMUST00000211701 740 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 Gm45734-201ENSMUST00000211916 411 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC8.41□□□□□ -1.06
Rfx1P48377 Gm9231-201ENSMUST00000220817 1009 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 AC174082.2-201ENSMUST00000222094 543 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 AC153153.2-201ENSMUST00000223572 411 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 AC238940.2-201ENSMUST00000224202 330 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Rfx1P48377 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rfx1P48377 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rfx1P48377 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rfx1P48377 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC8.41□□□□□ -1.06
Rfx1P48377 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rfx1P48377 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rfx1P48377 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Rfx1P48377 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rfx1P48377 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rfx1P48377 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC8.4□□□□□ -1.06
Rfx1P48377 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rfx1P48377 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rfx1P48377 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Rfx1P48377 Gm43328-201ENSMUST00000198544 1434 ntBASIC8.4□□□□□ -1.06
Rfx1P48377 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Rfx1P48377 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rfx1P48377 Gm11746-201ENSMUST00000119843 821 ntBASIC8.4□□□□□ -1.06
Rfx1P48377 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rfx1P48377 Gm9141-201ENSMUST00000159355 1007 ntBASIC8.4□□□□□ -1.06
Rfx1P48377 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Rfx1P48377 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC8.4□□□□□ -1.06
Rfx1P48377 Adgrg4-206ENSMUST00000168724 531 ntBASIC8.4□□□□□ -1.06
Rfx1P48377 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Rfx1P48377 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC8.4□□□□□ -1.06
Rfx1P48377 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rfx1P48377 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rfx1P48377 Gm27219-201ENSMUST00000184633 742 ntBASIC8.4□□□□□ -1.06
Rfx1P48377 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Rfx1P48377 Gm18033-201ENSMUST00000186678 550 ntBASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms