Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm28934-201ENSMUST00000186491 346 ntBASIC6.27□□□□□ -1.41
Cdx2P43241 Gm29357-201ENSMUST00000186877 698 ntBASIC6.27□□□□□ -1.41
Cdx2P43241 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm17824-201ENSMUST00000197690 805 ntBASIC6.27□□□□□ -1.41
Cdx2P43241 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm45739-201ENSMUST00000213094 388 ntBASIC6.27□□□□□ -1.41
Cdx2P43241 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx2P43241 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.27□□□□□ -1.41
Cdx2P43241 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
Cdx2P43241 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx2P43241 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.27□□□□□ -1.41
Cdx2P43241 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cdx2P43241 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Cdx2P43241 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.26□□□□□ -1.41
Cdx2P43241 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx2P43241 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx2P43241 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx2P43241 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC6.26□□□□□ -1.41
Cdx2P43241 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx2P43241 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Cdx2P43241 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Cdx2P43241 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx2P43241 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Cdx2P43241 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx2P43241 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx2P43241 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx2P43241 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx2P43241 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx2P43241 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdx2P43241 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdx2P43241 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Cdx2P43241 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx2P43241 Gm25795-201ENSMUST00000104421 132 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 Gm13930-201ENSMUST00000118569 368 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 Gm11198-201ENSMUST00000119771 974 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 Mup-ps16-201ENSMUST00000120085 596 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 Gm11533-201ENSMUST00000120287 477 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx2P43241 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Cdx2P43241 Gm23894-201ENSMUST00000158107 313 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 Gm24395-201ENSMUST00000158139 125 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 Gm24733-201ENSMUST00000158863 253 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 Gm27854-201ENSMUST00000175578 244 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 Mir5107-201ENSMUST00000175586 88 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 Mir7037-201ENSMUST00000184414 65 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 Mir7674-201ENSMUST00000184964 63 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 Ighv1-27-201ENSMUST00000194473 340 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.26□□□□□ -1.41
Cdx2P43241 Gm42753-201ENSMUST00000196718 1268 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 Gm31861-201ENSMUST00000204563 672 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC6.26□□□□□ -1.41
Cdx2P43241 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.26□□□□□ -1.41
Cdx2P43241 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 AC119894.1-201ENSMUST00000220399 350 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Cdx2P43241 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx2P43241 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Cdx2P43241 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Cdx2P43241 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx2P43241 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx2P43241 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx2P43241 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx2P43241 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx2P43241 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Cdx2P43241 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdx2P43241 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx2P43241 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.26□□□□□ -1.41
Cdx2P43241 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
Cdx2P43241 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Cdx2P43241 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Cdx2P43241 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
Cdx2P43241 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms