Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm5853-201ENSMUST00000197183 632 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC6.51□□□□□ -1.37
Lire1P11260 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC6.51□□□□□ -1.37
Lire1P11260 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC6.51□□□□□ -1.37
Lire1P11260 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Lire1P11260 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 AC159246.1-201ENSMUST00000214478 249 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Lire1P11260 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC6.51□□□□□ -1.37
Lire1P11260 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC6.51□□□□□ -1.37
Lire1P11260 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC6.51□□□□□ -1.37
Lire1P11260 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.51□□□□□ -1.37
Lire1P11260 CT030238.4-202ENSMUST00000226143 745 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 Gm23054-201ENSMUST00000082804 162 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Gm22504-201ENSMUST00000082963 139 ntBASIC6.51□□□□□ -1.37
Lire1P11260 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Lire1P11260 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Lire1P11260 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC6.5□□□□□ -1.37
Lire1P11260 Gm43313-201ENSMUST00000201398 2235 ntBASIC6.5□□□□□ -1.37
Lire1P11260 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
Lire1P11260 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Lire1P11260 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Lire1P11260 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC6.5□□□□□ -1.37
Lire1P11260 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC6.5□□□□□ -1.37
Lire1P11260 Gm14891-201ENSMUST00000117378 596 ntBASIC6.5□□□□□ -1.37
Lire1P11260 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC6.5□□□□□ -1.37
Lire1P11260 Gm11858-201ENSMUST00000117935 838 ntBASIC6.5□□□□□ -1.37
Lire1P11260 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC6.5□□□□□ -1.37
Lire1P11260 Gm11320-201ENSMUST00000119434 463 ntBASIC6.5□□□□□ -1.37
Lire1P11260 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Lire1P11260 Gm12477-201ENSMUST00000121221 571 ntBASIC6.5□□□□□ -1.37
Lire1P11260 Gm12321-201ENSMUST00000121485 804 ntBASIC6.5□□□□□ -1.37
Lire1P11260 Gm13899-201ENSMUST00000121519 1255 ntBASIC6.5□□□□□ -1.37
Lire1P11260 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.5□□□□□ -1.37
Lire1P11260 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC6.5□□□□□ -1.37
Lire1P11260 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.5□□□□□ -1.37
Lire1P11260 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC6.5□□□□□ -1.37
Lire1P11260 Gm9127-201ENSMUST00000188041 985 ntBASIC6.5□□□□□ -1.37
Lire1P11260 Gm38373-201ENSMUST00000192042 288 ntBASIC6.5□□□□□ -1.37
Lire1P11260 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC6.5□□□□□ -1.37
Lire1P11260 Gm38079-201ENSMUST00000195603 154 ntBASIC6.5□□□□□ -1.37
Lire1P11260 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC6.5□□□□□ -1.37
Lire1P11260 Gm34583-203ENSMUST00000202586 454 ntBASIC6.5□□□□□ -1.37
Lire1P11260 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.5□□□□□ -1.37
Lire1P11260 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC6.5□□□□□ -1.37
Lire1P11260 Gm8058-201ENSMUST00000217247 587 ntBASIC6.5□□□□□ -1.37
Lire1P11260 AC127224.1-201ENSMUST00000218094 453 ntBASIC6.5□□□□□ -1.37
Lire1P11260 Gm19217-201ENSMUST00000218238 328 ntBASIC6.5□□□□□ -1.37
Lire1P11260 AC151904.5-201ENSMUST00000218975 549 ntBASIC6.5□□□□□ -1.37
Lire1P11260 CT025639.2-201ENSMUST00000224440 1220 ntBASIC6.5□□□□□ -1.37
Lire1P11260 Mir7b-201ENSMUST00000083557 111 ntBASIC6.5□□□□□ -1.37
Lire1P11260 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.5□□□□□ -1.37
Lire1P11260 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Lire1P11260 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Lire1P11260 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.5□□□□□ -1.37
Lire1P11260 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.5□□□□□ -1.37
Lire1P11260 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Lire1P11260 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
Lire1P11260 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Lire1P11260 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Lire1P11260 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
Lire1P11260 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.5□□□□□ -1.37
Lire1P11260 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Lire1P11260 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
Lire1P11260 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
Lire1P11260 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Lire1P11260 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms