Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
P06344 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
P06344 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
P06344 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC5.84□□□□□ -1.47
P06344 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC5.84□□□□□ -1.47
P06344 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC5.84□□□□□ -1.47
P06344 Gm43436-201ENSMUST00000199308 147 ntBASIC5.84□□□□□ -1.47
P06344 Gm44374-201ENSMUST00000199821 140 ntBASIC5.84□□□□□ -1.47
P06344 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC5.84□□□□□ -1.47
P06344 Gm43772-201ENSMUST00000202052 379 ntBASIC5.84□□□□□ -1.47
P06344 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
P06344 Gm44984-201ENSMUST00000207802 394 ntBASIC5.84□□□□□ -1.47
P06344 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
P06344 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC5.84□□□□□ -1.47
P06344 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC5.84□□□□□ -1.47
P06344 Gm18781-201ENSMUST00000211252 924 ntBASIC5.84□□□□□ -1.47
P06344 Gm45514-201ENSMUST00000211531 689 ntBASIC5.84□□□□□ -1.47
P06344 Gm7413-201ENSMUST00000219498 462 ntBASIC5.84□□□□□ -1.47
P06344 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC5.84□□□□□ -1.47
P06344 AC174082.2-201ENSMUST00000222094 543 ntBASIC5.84□□□□□ -1.47
P06344 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
P06344 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
P06344 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
P06344 Gm45786-201ENSMUST00000213021 2278 ntBASIC5.84□□□□□ -1.47
P06344 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
P06344 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
P06344 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
P06344 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
P06344 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
P06344 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
P06344 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
P06344 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
P06344 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
P06344 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
P06344 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
P06344 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
P06344 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC5.83□□□□□ -1.48
P06344 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
P06344 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
P06344 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
P06344 Gm12439-201ENSMUST00000117162 365 ntBASIC5.83□□□□□ -1.48
P06344 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC5.83□□□□□ -1.48
P06344 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC5.83□□□□□ -1.48
P06344 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.83□□□□□ -1.48
P06344 Gm14747-201ENSMUST00000149888 984 ntBASIC5.83□□□□□ -1.48
P06344 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC5.83□□□□□ -1.48
P06344 Gm11107-201ENSMUST00000165414 505 ntBASIC5.83□□□□□ -1.48
P06344 Gm25244-201ENSMUST00000178089 132 ntBASIC5.83□□□□□ -1.48
P06344 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
P06344 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Gm18447-201ENSMUST00000187501 307 ntBASIC5.83□□□□□ -1.48
P06344 Gm17847-201ENSMUST00000188261 1127 ntBASIC5.83□□□□□ -1.48
P06344 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC5.83□□□□□ -1.48
P06344 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC5.83□□□□□ -1.48
P06344 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Gm18620-201ENSMUST00000222295 324 ntBASIC5.83□□□□□ -1.48
P06344 Gm5374-202ENSMUST00000222910 314 ntBASIC5.83□□□□□ -1.48
P06344 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
P06344 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
P06344 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
P06344 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC5.83□□□□□ -1.48
P06344 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
P06344 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
P06344 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
P06344 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
P06344 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC5.83□□□□□ -1.48
P06344 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC5.83□□□□□ -1.48
P06344 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
P06344 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC5.83□□□□□ -1.48
P06344 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
P06344 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
P06344 AC158537.1-201ENSMUST00000224637 1711 ntBASIC5.82□□□□□ -1.48
P06344 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
P06344 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC5.82□□□□□ -1.48
P06344 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
P06344 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
P06344 Gm37772-201ENSMUST00000191635 1394 ntBASIC5.82□□□□□ -1.48
P06344 AC164567.3-201ENSMUST00000217743 2869 ntBASIC5.82□□□□□ -1.48
P06344 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
P06344 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
P06344 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms