Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm6490-201ENSMUST00000111862 461 ntBASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm12344-201ENSMUST00000117087 329 ntBASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm7821-201ENSMUST00000117111 788 ntBASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm15081-201ENSMUST00000119794 844 ntBASIC5.21□□□□□ -1.58
Hmgb3O54879 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC5.21□□□□□ -1.58
Hmgb3O54879 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm22948-201ENSMUST00000158561 243 ntBASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm22523-201ENSMUST00000158696 100 ntBASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm6918-201ENSMUST00000167622 1222 ntBASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm26736-201ENSMUST00000180425 1236 ntBASIC5.21□□□□□ -1.58
Hmgb3O54879 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm21392-201ENSMUST00000182950 972 ntBASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC5.21□□□□□ -1.58
Hmgb3O54879 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC5.21□□□□□ -1.58
Hmgb3O54879 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm2225-201ENSMUST00000209570 377 ntBASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC5.21□□□□□ -1.58
Hmgb3O54879 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Hmgb3O54879 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hmgb3O54879 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC5.21□□□□□ -1.58
Hmgb3O54879 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC5.21□□□□□ -1.58
Hmgb3O54879 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.21□□□□□ -1.58
Hmgb3O54879 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hmgb3O54879 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hmgb3O54879 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hmgb3O54879 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hmgb3O54879 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Hmgb3O54879 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hmgb3O54879 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.21□□□□□ -1.58
Hmgb3O54879 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hmgb3O54879 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm18796-201ENSMUST00000190440 1767 ntBASIC5.21□□□□□ -1.58
Hmgb3O54879 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm10601-201ENSMUST00000120436 1422 ntBASIC5.21□□□□□ -1.58
Hmgb3O54879 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Hmgb3O54879 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Hmgb3O54879 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Hmgb3O54879 AC113031.7-201ENSMUST00000228609 1928 ntBASIC5.21□□□□□ -1.58
Hmgb3O54879 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Hmgb3O54879 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.21□□□□□ -1.58
Hmgb3O54879 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Hmgb3O54879 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm11590-201ENSMUST00000118999 1455 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Hmgb3O54879 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Hmgb3O54879 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Hmgb3O54879 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Hmgb3O54879 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Hmgb3O54879 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Hmgb3O54879 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Hmgb3O54879 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Hmgb3O54879 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 Mir705-201ENSMUST00000102058 82 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm23484-201ENSMUST00000104178 131 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Hmgb3O54879 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC5.2□□□□□ -1.58
Hmgb3O54879 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm12937-201ENSMUST00000118333 448 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm13486-201ENSMUST00000119910 282 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm15538-201ENSMUST00000121410 313 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm15928-201ENSMUST00000122455 280 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm23954-201ENSMUST00000157213 353 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm22094-201ENSMUST00000158976 117 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm20691-201ENSMUST00000176889 333 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Mir6367-201ENSMUST00000183385 102 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm27152-201ENSMUST00000183828 99 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm6610-201ENSMUST00000186324 358 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC5.2□□□□□ -1.58
Hmgb3O54879 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm43689-201ENSMUST00000195951 427 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 Gm42965-201ENSMUST00000201254 250 ntBASIC5.2□□□□□ -1.58
Hmgb3O54879 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms