Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm11653-201ENSMUST00000119992 1009 ntBASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm14900-201ENSMUST00000120304 733 ntBASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm15305-201ENSMUST00000120354 288 ntBASIC6.14□□□□□ -1.43
Use1Q9CQ56 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm14038-201ENSMUST00000121500 807 ntBASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.14□□□□□ -1.43
Use1Q9CQ56 Mir1903-201ENSMUST00000122574 80 ntBASIC6.14□□□□□ -1.43
Use1Q9CQ56 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm25962-201ENSMUST00000157173 168 ntBASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm24735-201ENSMUST00000158859 118 ntBASIC6.14□□□□□ -1.43
Use1Q9CQ56 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm20926-201ENSMUST00000194457 696 ntBASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm44342-201ENSMUST00000196874 129 ntBASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC6.14□□□□□ -1.43
Use1Q9CQ56 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm44383-201ENSMUST00000198940 129 ntBASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm43089-201ENSMUST00000199162 275 ntBASIC6.14□□□□□ -1.43
Use1Q9CQ56 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm18838-201ENSMUST00000204855 886 ntBASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm45246-201ENSMUST00000210820 367 ntBASIC6.14□□□□□ -1.43
Use1Q9CQ56 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Use1Q9CQ56 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.14□□□□□ -1.43
Use1Q9CQ56 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.14□□□□□ -1.43
Use1Q9CQ56 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Use1Q9CQ56 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm24621-201ENSMUST00000082679 140 ntBASIC6.14□□□□□ -1.43
Use1Q9CQ56 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Use1Q9CQ56 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.14□□□□□ -1.43
Use1Q9CQ56 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Use1Q9CQ56 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Use1Q9CQ56 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm11858-201ENSMUST00000117935 838 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm14584-201ENSMUST00000118956 637 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm14631-201ENSMUST00000119067 594 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm11976-201ENSMUST00000119236 295 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm11726-201ENSMUST00000121028 424 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm4997-201ENSMUST00000154056 360 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm22235-201ENSMUST00000157085 110 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm23392-201ENSMUST00000157580 113 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm22728-201ENSMUST00000158087 129 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm26587-201ENSMUST00000180795 989 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm34144-201ENSMUST00000197039 259 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Use1Q9CQ56 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC6.13□□□□□ -1.43
Use1Q9CQ56 AC122539.1-201ENSMUST00000219925 329 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 AC133598.2-201ENSMUST00000224302 624 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 AC154692.1-202ENSMUST00000226632 1231 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.13□□□□□ -1.43
Use1Q9CQ56 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Use1Q9CQ56 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms