Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm12219-201ENSMUST00000119198 443 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm13940-201ENSMUST00000121023 301 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm11954-201ENSMUST00000121403 349 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm9001-201ENSMUST00000121642 399 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm16471-201ENSMUST00000121940 618 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm24893-201ENSMUST00000122745 369 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm15275-201ENSMUST00000154752 347 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm24393-201ENSMUST00000158135 97 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm23385-201ENSMUST00000158592 295 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm17377-201ENSMUST00000165184 207 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Mir199b-201ENSMUST00000175066 110 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Mir1231-201ENSMUST00000175639 81 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm6445-201ENSMUST00000189515 1112 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm37771-201ENSMUST00000193121 265 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm18747-201ENSMUST00000198129 648 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm7368-201ENSMUST00000213307 367 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm6581-201ENSMUST00000214545 260 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm18914-201ENSMUST00000214625 616 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm9231-201ENSMUST00000220817 1009 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Vmn1r41-202ENSMUST00000226337 888 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 AC107757.1-201ENSMUST00000226780 357 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm2840-201ENSMUST00000048361 411 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 AC155710.1-201ENSMUST00000219913 1353 ntBASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim11Q99PQ2 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm37460-201ENSMUST00000191796 2249 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm22671-201ENSMUST00000104420 134 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm6429-201ENSMUST00000117144 475 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm13163-201ENSMUST00000119875 336 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm14251-201ENSMUST00000122133 279 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm23657-201ENSMUST00000122623 294 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm23740-201ENSMUST00000157385 100 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm22206-201ENSMUST00000158612 116 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm4613-201ENSMUST00000165488 276 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm21430-201ENSMUST00000182998 998 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm28428-201ENSMUST00000188886 697 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm31579-201ENSMUST00000203306 966 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm44118-201ENSMUST00000204665 229 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm6261-201ENSMUST00000204707 760 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 AC122393.1-201ENSMUST00000226570 319 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 AC125087.1-201ENSMUST00000227552 514 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 AC122937.2-201ENSMUST00000228258 1051 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 n-R5s60-201ENSMUST00000083299 119 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms