Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.48□□□□□ -1.37
Msh4Q99MT2 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC6.48□□□□□ -1.37
Msh4Q99MT2 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.48□□□□□ -1.37
Msh4Q99MT2 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Msh4Q99MT2 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.48□□□□□ -1.37
Msh4Q99MT2 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Msh4Q99MT2 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Msh4Q99MT2 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.48□□□□□ -1.37
Msh4Q99MT2 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Msh4Q99MT2 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.48□□□□□ -1.37
Msh4Q99MT2 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Msh4Q99MT2 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Msh4Q99MT2 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
Msh4Q99MT2 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.48□□□□□ -1.37
Msh4Q99MT2 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Msh4Q99MT2 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
Msh4Q99MT2 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Msh4Q99MT2 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Msh4Q99MT2 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Msh4Q99MT2 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Msh4Q99MT2 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Msh4Q99MT2 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Msh4Q99MT2 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Msh4Q99MT2 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm11501-201ENSMUST00000118039 581 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm13156-201ENSMUST00000118348 321 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm23082-201ENSMUST00000157852 133 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm24176-201ENSMUST00000158928 121 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm25574-201ENSMUST00000175245 249 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm22642-201ENSMUST00000175352 252 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm6061-201ENSMUST00000175860 492 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm29588-201ENSMUST00000185738 298 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm29156-201ENSMUST00000187764 499 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm5244-202ENSMUST00000189517 743 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm45078-201ENSMUST00000205343 546 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm18377-201ENSMUST00000215141 607 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm19169-201ENSMUST00000220109 1246 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm9267-201ENSMUST00000222831 404 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 AW822073-201ENSMUST00000075305 555 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Mir106b-201ENSMUST00000083580 82 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 AC158537.1-201ENSMUST00000224637 1711 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Msh4Q99MT2 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.47□□□□□ -1.37
Msh4Q99MT2 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Msh4Q99MT2 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Msh4Q99MT2 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.46□□□□□ -1.37
Msh4Q99MT2 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Msh4Q99MT2 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Msh4Q99MT2 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Msh4Q99MT2 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms