Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm37700-201ENSMUST00000192617 965 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm44833-201ENSMUST00000208368 331 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm9604-201ENSMUST00000211175 433 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm45739-201ENSMUST00000213094 388 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.53□□□□□ -1.36
Clrn1Q8K445 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 AC192616.1-201ENSMUST00000221922 132 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 AC159188.3-201ENSMUST00000224199 880 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 AC154245.1-201ENSMUST00000224615 601 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 AC108945.1-201ENSMUST00000226477 94 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 AC156790.1-201ENSMUST00000226572 559 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm24451-201ENSMUST00000083353 133 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm19210-201ENSMUST00000199562 1350 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 AC154482.1-201ENSMUST00000223248 2483 ntBASIC6.53□□□□□ -1.36
Clrn1Q8K445 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.53□□□□□ -1.36
Clrn1Q8K445 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clrn1Q8K445 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm7648-201ENSMUST00000173036 1658 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm44101-201ENSMUST00000203951 2221 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Clrn1Q8K445 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm44704-201ENSMUST00000208963 1990 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Mir760-201ENSMUST00000103257 119 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm26417-201ENSMUST00000104274 135 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm25379-201ENSMUST00000104338 114 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm14788-201ENSMUST00000119457 375 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm13221-201ENSMUST00000121712 430 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 BC064078-201ENSMUST00000122939 570 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm23077-201ENSMUST00000157854 116 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm27762-201ENSMUST00000183417 109 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm27782-201ENSMUST00000185059 199 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm18875-201ENSMUST00000188563 882 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm7412-201ENSMUST00000191692 605 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Mir1892-201ENSMUST00000197752 80 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm44053-201ENSMUST00000203364 929 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm44253-201ENSMUST00000203387 628 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm19092-201ENSMUST00000209036 969 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm18655-201ENSMUST00000214802 1090 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC6.52□□□□□ -1.37
Clrn1Q8K445 AC118230.1-201ENSMUST00000220196 656 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 AC164597.2-201ENSMUST00000226738 603 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 AC158981.3-201ENSMUST00000226844 1024 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 AC154738.1-201ENSMUST00000227054 368 ntBASIC6.52□□□□□ -1.37
Clrn1Q8K445 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clrn1Q8K445 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clrn1Q8K445 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Clrn1Q8K445 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms