Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm7943-201ENSMUST00000212078 1034 ntBASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 AC153847.1-201ENSMUST00000214524 353 ntBASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Gm5374-202ENSMUST00000222910 314 ntBASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Mif-ps7-201ENSMUST00000223357 327 ntBASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Gm6327-201ENSMUST00000171185 1335 ntBASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm25083-201ENSMUST00000102319 92 ntBASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm13141-201ENSMUST00000117417 456 ntBASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm11858-201ENSMUST00000117935 838 ntBASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm14356-201ENSMUST00000118322 869 ntBASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm12115-201ENSMUST00000119969 447 ntBASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm11653-201ENSMUST00000119992 1009 ntBASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm14353-201ENSMUST00000122200 869 ntBASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm37376-201ENSMUST00000192176 453 ntBASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm37620-201ENSMUST00000192910 501 ntBASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm19739-201ENSMUST00000195941 153 ntBASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm42804-201ENSMUST00000199701 178 ntBASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm44979-201ENSMUST00000206218 287 ntBASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm4042-201ENSMUST00000216946 637 ntBASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc28aQ8CEI3 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Gm25546-201ENSMUST00000103977 132 ntBASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Gm12306-201ENSMUST00000117256 171 ntBASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Gm14612-201ENSMUST00000121522 881 ntBASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Gm6081-201ENSMUST00000134472 489 ntBASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Gm28846-201ENSMUST00000189161 368 ntBASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Gm5244-202ENSMUST00000189517 743 ntBASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Gm45070-201ENSMUST00000208100 246 ntBASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Gm45509-201ENSMUST00000209624 1229 ntBASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 Gm8290-201ENSMUST00000218202 477 ntBASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 AC122539.1-201ENSMUST00000219925 329 ntBASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC6.72□□□□□ -1.33
Ccdc28aQ8CEI3 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms