Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Gm23437-201ENSMUST00000104036 127 ntBASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Gm14865-201ENSMUST00000117523 494 ntBASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Gm17022-201ENSMUST00000166415 922 ntBASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Gm27178-201ENSMUST00000184962 340 ntBASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Gm28573-201ENSMUST00000187821 380 ntBASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Gm28546-201ENSMUST00000188221 615 ntBASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Gm28145-201ENSMUST00000189742 380 ntBASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Gm4322-201ENSMUST00000191094 336 ntBASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Gm28400-201ENSMUST00000191332 380 ntBASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Gm43595-201ENSMUST00000196464 1071 ntBASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Gm45100-201ENSMUST00000209153 391 ntBASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 AC158531.2-201ENSMUST00000224264 473 ntBASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 AC141425.1-201ENSMUST00000224989 265 ntBASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 AC170999.2-201ENSMUST00000226223 264 ntBASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Ccdc28bQ8CEG5 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.39
Ccdc28bQ8CEG5 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.4□□□□□ -1.39
Ccdc28bQ8CEG5 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Ccdc28bQ8CEG5 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Ccdc28bQ8CEG5 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Ccdc28bQ8CEG5 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Ccdc28bQ8CEG5 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Ccdc28bQ8CEG5 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Ccdc28bQ8CEG5 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.4□□□□□ -1.39
Ccdc28bQ8CEG5 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ccdc28bQ8CEG5 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Ccdc28bQ8CEG5 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Gm37163-201ENSMUST00000195439 1690 ntBASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Gm25311-201ENSMUST00000104136 132 ntBASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Gm26016-201ENSMUST00000104403 129 ntBASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Gm24986-201ENSMUST00000104452 132 ntBASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Gm12219-201ENSMUST00000119198 443 ntBASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Gm12331-201ENSMUST00000119927 622 ntBASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Gm22276-201ENSMUST00000122469 129 ntBASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Gm22094-201ENSMUST00000158976 117 ntBASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Gm27152-201ENSMUST00000183828 99 ntBASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Gm35323-201ENSMUST00000191836 499 ntBASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Gm2860-201ENSMUST00000199226 707 ntBASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Gm44931-201ENSMUST00000206056 545 ntBASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Ccdc28bQ8CEG5 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms