Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm22374-201ENSMUST00000104583 132 ntBASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm15765-201ENSMUST00000118407 910 ntBASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm14870-201ENSMUST00000118414 156 ntBASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm5125-201ENSMUST00000148614 624 ntBASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm8581-201ENSMUST00000188636 890 ntBASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm37310-201ENSMUST00000195237 2968 ntBASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm43850-201ENSMUST00000202021 578 ntBASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 AC153968.2-201ENSMUST00000215579 1140 ntBASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm46364-201ENSMUST00000218548 319 ntBASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm4803-201ENSMUST00000218729 1279 ntBASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm2531-201ENSMUST00000075609 512 ntBASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm24695-201ENSMUST00000083877 83 ntBASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.72□□□□□ -1.33
Sh3rf2Q8BZT2 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Sh3rf2Q8BZT2 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.71□□□□□ -1.33
Sh3rf2Q8BZT2 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Sh3rf2Q8BZT2 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Sh3rf2Q8BZT2 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm8534-201ENSMUST00000118553 766 ntBASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm13222-201ENSMUST00000119638 138 ntBASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm14038-201ENSMUST00000121500 807 ntBASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm12152-201ENSMUST00000122465 684 ntBASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm25117-201ENSMUST00000157194 144 ntBASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm23031-201ENSMUST00000157998 119 ntBASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm23071-201ENSMUST00000158242 115 ntBASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm5277-201ENSMUST00000164923 556 ntBASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm26557-201ENSMUST00000180756 493 ntBASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm7891-201ENSMUST00000190284 843 ntBASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm37493-201ENSMUST00000193167 433 ntBASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm44361-201ENSMUST00000197960 94 ntBASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm44162-201ENSMUST00000203543 544 ntBASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Gm17918-201ENSMUST00000205315 574 ntBASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Sh3rf2Q8BZT2 Olfr923-204ENSMUST00000219798 1068 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms