Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 CT025526.1-201ENSMUST00000217327 267 ntBASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm9535-201ENSMUST00000218499 768 ntBASIC9.06□□□□□ -0.96
Usp40Q8BWR4 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 AC140930.1-201ENSMUST00000221889 389 ntBASIC9.06□□□□□ -0.96
Usp40Q8BWR4 AL671874.1-201ENSMUST00000223746 1123 ntBASIC9.06□□□□□ -0.96
Usp40Q8BWR4 AC117769.2-201ENSMUST00000224612 469 ntBASIC9.06□□□□□ -0.96
Usp40Q8BWR4 AC116591.1-201ENSMUST00000227919 351 ntBASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp40Q8BWR4 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Gm37745-201ENSMUST00000193304 8163 ntBASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 AC135083.2-201ENSMUST00000228599 1456 ntBASIC9.05□□□□□ -0.96
Usp40Q8BWR4 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Gm12073-201ENSMUST00000117382 524 ntBASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Gm6027-201ENSMUST00000121467 756 ntBASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Gm23259-201ENSMUST00000158318 303 ntBASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Gm9274-201ENSMUST00000182505 984 ntBASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Gm27853-201ENSMUST00000184176 250 ntBASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Gm44038-201ENSMUST00000203952 889 ntBASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC9.05□□□□□ -0.96
Usp40Q8BWR4 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Gm18871-201ENSMUST00000218655 745 ntBASIC9.05□□□□□ -0.96
Usp40Q8BWR4 AC151904.3-201ENSMUST00000219266 895 ntBASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Mylf-ps-201ENSMUST00000222174 421 ntBASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC9.05□□□□□ -0.96
Usp40Q8BWR4 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 AC158115.1-201ENSMUST00000222830 3182 ntBASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 AC135119.1-204ENSMUST00000228036 2663 ntBASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Gm36981-201ENSMUST00000192340 4485 ntBASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Gm12262-201ENSMUST00000119915 305 ntBASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Gm15300-201ENSMUST00000122324 279 ntBASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Mir6367-201ENSMUST00000183385 102 ntBASIC9.04□□□□□ -0.96
Usp40Q8BWR4 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Gm44582-201ENSMUST00000209125 445 ntBASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Gm18851-201ENSMUST00000210087 1058 ntBASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC9.04□□□□□ -0.96
Usp40Q8BWR4 AC154795.1-201ENSMUST00000225611 364 ntBASIC9.04□□□□□ -0.96
Usp40Q8BWR4 AC137871.3-201ENSMUST00000226628 225 ntBASIC9.04□□□□□ -0.96
Usp40Q8BWR4 AC154563.1-201ENSMUST00000228317 442 ntBASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms