Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Gm21920-201ENSMUST00000190042 695 ntBASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Gm42782-201ENSMUST00000197286 522 ntBASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Gm43141-201ENSMUST00000199695 274 ntBASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Gm9419-201ENSMUST00000200672 567 ntBASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Gm17822-201ENSMUST00000204307 351 ntBASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Gm20136-201ENSMUST00000207501 891 ntBASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 AC171206.1-201ENSMUST00000213612 213 ntBASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 AC124184.1-201ENSMUST00000218167 283 ntBASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Gm7690-201ENSMUST00000190885 1399 ntBASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.89□□□□□ -1.31
Ccdc40Q8BI79 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm14070-201ENSMUST00000120773 428 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm22728-201ENSMUST00000158087 129 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm24680-201ENSMUST00000158759 126 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm22533-201ENSMUST00000158821 274 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm25025-201ENSMUST00000175018 111 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Mir7011-201ENSMUST00000183768 73 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm9114-201ENSMUST00000188558 997 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm29214-201ENSMUST00000190216 570 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm37491-201ENSMUST00000192552 1111 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm38217-201ENSMUST00000194358 910 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm8182-201ENSMUST00000197863 769 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm19092-201ENSMUST00000209036 969 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm17849-201ENSMUST00000219788 853 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ccdc40Q8BI79 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms