Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC7.65□□□□□ -1.18
Ddx55Q6ZPL9 Gm10416-201ENSMUST00000197379 645 ntBASIC7.65□□□□□ -1.18
Ddx55Q6ZPL9 BC049739-201ENSMUST00000202626 660 ntBASIC7.65□□□□□ -1.18
Ddx55Q6ZPL9 Gm18839-201ENSMUST00000204292 670 ntBASIC7.65□□□□□ -1.18
Ddx55Q6ZPL9 Gm44982-201ENSMUST00000208795 471 ntBASIC7.65□□□□□ -1.18
Ddx55Q6ZPL9 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC7.65□□□□□ -1.18
Ddx55Q6ZPL9 Gm9535-201ENSMUST00000218499 768 ntBASIC7.65□□□□□ -1.18
Ddx55Q6ZPL9 AC154431.2-201ENSMUST00000225215 1055 ntBASIC7.65□□□□□ -1.18
Ddx55Q6ZPL9 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
Ddx55Q6ZPL9 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ddx55Q6ZPL9 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ddx55Q6ZPL9 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ddx55Q6ZPL9 Tcf24-201ENSMUST00000097824 2639 ntBASIC7.65□□□□□ -1.18
Ddx55Q6ZPL9 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ddx55Q6ZPL9 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ddx55Q6ZPL9 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Ddx55Q6ZPL9 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ddx55Q6ZPL9 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ddx55Q6ZPL9 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ddx55Q6ZPL9 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
Ddx55Q6ZPL9 Gm45537-201ENSMUST00000211539 2708 ntBASIC7.65□□□□□ -1.19
Ddx55Q6ZPL9 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ddx55Q6ZPL9 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC7.65□□□□□ -1.19
Ddx55Q6ZPL9 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm23884-201ENSMUST00000122687 294 ntBASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm25433-201ENSMUST00000158283 286 ntBASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm27854-201ENSMUST00000175578 244 ntBASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Mir7220-201ENSMUST00000183978 60 ntBASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm37604-201ENSMUST00000191749 1272 ntBASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm36935-201ENSMUST00000192526 292 ntBASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm31861-201ENSMUST00000204563 672 ntBASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm45845-201ENSMUST00000207326 582 ntBASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm18467-201ENSMUST00000208805 434 ntBASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm9472-201ENSMUST00000221625 526 ntBASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm29670-201ENSMUST00000190228 2491 ntBASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx55Q6ZPL9 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm44777-201ENSMUST00000205941 4052 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 CT010514.1-201ENSMUST00000214088 2969 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm12099-201ENSMUST00000118660 750 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm4732-201ENSMUST00000118778 473 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm15621-201ENSMUST00000119162 364 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms