Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Gm4540-201ENSMUST00000170669 429 ntBASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Gm27014-201ENSMUST00000182658 937 ntBASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Gm27360-201ENSMUST00000183487 80 ntBASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Mir378d-201ENSMUST00000184232 110 ntBASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Gm7634-201ENSMUST00000185778 553 ntBASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Gm4860-201ENSMUST00000200368 454 ntBASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Gm17918-201ENSMUST00000205315 574 ntBASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 AC123920.1-201ENSMUST00000221449 384 ntBASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 AC166574.3-201ENSMUST00000226725 367 ntBASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Gm17076-201ENSMUST00000165185 1401 ntBASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Fbxo16-203ENSMUST00000224629 3781 ntAPPRIS P2 BASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 AC113031.7-201ENSMUST00000228609 1928 ntBASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Ccdc85aQ5SP85 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm25311-201ENSMUST00000104136 132 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm23768-201ENSMUST00000104440 131 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm26211-201ENSMUST00000158578 129 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Ccdc127-203ENSMUST00000160021 2682 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm3123-201ENSMUST00000163480 480 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm9286-201ENSMUST00000173586 508 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm26528-201ENSMUST00000181965 283 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm37920-201ENSMUST00000192952 749 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 AC099934.1-201ENSMUST00000200493 79 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm4751-201ENSMUST00000200620 1105 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm44192-201ENSMUST00000204195 556 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm17822-201ENSMUST00000204307 351 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm44896-201ENSMUST00000206190 772 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm44620-201ENSMUST00000209183 2887 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm46103-201ENSMUST00000217614 341 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm18338-201ENSMUST00000222381 560 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 AC134860.4-201ENSMUST00000223592 978 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 CT010453.2-201ENSMUST00000227005 483 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 CT025525.3-201ENSMUST00000228858 366 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Gm29113-201ENSMUST00000185991 3432 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 AC158605.4-201ENSMUST00000219013 3361 ntBASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc85aQ5SP85 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc85aQ5SP85 Gm37535-201ENSMUST00000194442 2365 ntBASIC8.15□□□□□ -1.1
Ccdc85aQ5SP85 Gm10743-201ENSMUST00000219611 2358 ntBASIC8.15□□□□□ -1.1
Ccdc85aQ5SP85 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC8.15□□□□□ -1.1
Ccdc85aQ5SP85 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc85aQ5SP85 Gm19028-201ENSMUST00000189614 1873 ntBASIC8.15□□□□□ -1.1
Ccdc85aQ5SP85 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc85aQ5SP85 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC8.15□□□□□ -1.1
Ccdc85aQ5SP85 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms