Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Gm23054-201ENSMUST00000082804 162 ntBASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.62□□□□□ -1.35
Usp39Q3TIX9 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm23437-201ENSMUST00000104036 127 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm6743-201ENSMUST00000117345 1066 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm15007-201ENSMUST00000119982 710 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm12903-201ENSMUST00000121015 544 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm16284-201ENSMUST00000140995 400 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm14368-201ENSMUST00000145305 415 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm24286-201ENSMUST00000157632 128 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm24682-201ENSMUST00000158764 137 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm17217-201ENSMUST00000166613 469 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 n-R5s93-201ENSMUST00000180091 119 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm29383-201ENSMUST00000188284 480 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm3841-201ENSMUST00000191399 451 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm44565-201ENSMUST00000208194 269 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm9604-201ENSMUST00000211175 433 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm45725-201ENSMUST00000212962 337 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm18655-201ENSMUST00000214802 1090 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Usp39Q3TIX9 AC162301.1-201ENSMUST00000228785 1542 ntBASIC6.6□□□□□ -1.35
Usp39Q3TIX9 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Usp39Q3TIX9 Gm7416-201ENSMUST00000117448 1487 ntBASIC6.6□□□□□ -1.35
Usp39Q3TIX9 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Usp39Q3TIX9 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.6□□□□□ -1.35
Usp39Q3TIX9 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Usp39Q3TIX9 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Usp39Q3TIX9 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Usp39Q3TIX9 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Usp39Q3TIX9 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Usp39Q3TIX9 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
Usp39Q3TIX9 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
Usp39Q3TIX9 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.6□□□□□ -1.35
Usp39Q3TIX9 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC6.6□□□□□ -1.35
Usp39Q3TIX9 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Usp39Q3TIX9 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Usp39Q3TIX9 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.6□□□□□ -1.35
Usp39Q3TIX9 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms