Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm14503-201ENSMUST00000130337 1164 ntBASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Mir1929-201ENSMUST00000158635 93 ntBASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm24228-201ENSMUST00000158829 129 ntBASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm17212-201ENSMUST00000166666 259 ntBASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm3760-201ENSMUST00000167475 804 ntBASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm3650-201ENSMUST00000180600 747 ntBASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC5.81□□□□□ -1.48
Sec61a1P61620 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm43546-201ENSMUST00000196721 943 ntBASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm43748-201ENSMUST00000202329 1233 ntBASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm42713-201ENSMUST00000202709 945 ntBASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm45136-201ENSMUST00000205793 943 ntBASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm30646-201ENSMUST00000207662 180 ntBASIC5.81□□□□□ -1.48
Sec61a1P61620 AC153522.1-201ENSMUST00000220047 1090 ntBASIC5.81□□□□□ -1.48
Sec61a1P61620 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sec61a1P61620 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Sec61a1P61620 CT030194.1-201ENSMUST00000225507 532 ntBASIC5.81□□□□□ -1.48
Sec61a1P61620 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm5321-201ENSMUST00000072050 447 ntBASIC5.81□□□□□ -1.48
Sec61a1P61620 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sec61a1P61620 n-R5s41-201ENSMUST00000083025 119 ntBASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm24451-201ENSMUST00000083353 133 ntBASIC5.81□□□□□ -1.48
Sec61a1P61620 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sec61a1P61620 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sec61a1P61620 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sec61a1P61620 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Thap6-201ENSMUST00000191860 3151 ntBASIC5.81□□□□□ -1.48
Sec61a1P61620 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sec61a1P61620 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Sec61a1P61620 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sec61a1P61620 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sec61a1P61620 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sec61a1P61620 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sec61a1P61620 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sec61a1P61620 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC5.8□□□□□ -1.48
Sec61a1P61620 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sec61a1P61620 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sec61a1P61620 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm14938-201ENSMUST00000119482 943 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm12654-201ENSMUST00000120387 587 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm15187-201ENSMUST00000122329 264 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm25962-201ENSMUST00000157173 168 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm23891-201ENSMUST00000158114 138 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm27360-201ENSMUST00000183487 80 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC5.8□□□□□ -1.48
Sec61a1P61620 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm37857-201ENSMUST00000191784 1199 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm34144-201ENSMUST00000197039 259 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC5.8□□□□□ -1.48
Sec61a1P61620 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sec61a1P61620 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm44565-201ENSMUST00000208194 269 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm2221-201ENSMUST00000209342 418 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm45514-201ENSMUST00000211531 689 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC5.8□□□□□ -1.48
Sec61a1P61620 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC5.8□□□□□ -1.48
Sec61a1P61620 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sec61a1P61620 AL713985.1-201ENSMUST00000219030 420 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 Gm9472-201ENSMUST00000221625 526 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 AC161275.1-201ENSMUST00000224668 208 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 CT009713.1-201ENSMUST00000224828 853 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 AC096628.1-201ENSMUST00000226060 641 ntBASIC5.8□□□□□ -1.48
Sec61a1P61620 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sec61a1P61620 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sec61a1P61620 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms