Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.53□□□□□ -1.36
Sf3b6P59708 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm22224-201ENSMUST00000157357 93 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm22262-201ENSMUST00000158713 86 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm4246-201ENSMUST00000172822 216 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm8974-201ENSMUST00000175770 479 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm27659-201ENSMUST00000183472 98 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm6799-201ENSMUST00000186919 573 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm38164-201ENSMUST00000192810 330 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm42424-201ENSMUST00000198319 376 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm42472-201ENSMUST00000201626 859 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm18160-201ENSMUST00000214279 827 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Rpl32l-201ENSMUST00000216127 399 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 AC163038.4-201ENSMUST00000224942 474 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Sf3b6P59708 AC162301.1-201ENSMUST00000228785 1542 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Gm43023-201ENSMUST00000197583 2106 ntBASIC6.53□□□□□ -1.36
Sf3b6P59708 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
Sf3b6P59708 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sf3b6P59708 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.36
Sf3b6P59708 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Sf3b6P59708 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm37611-201ENSMUST00000195250 2028 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC6.52□□□□□ -1.37
Sf3b6P59708 AC129308.1-201ENSMUST00000223800 2309 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm24195-201ENSMUST00000116804 137 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm12075-201ENSMUST00000117426 397 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm13260-201ENSMUST00000117797 1264 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm14335-201ENSMUST00000119165 810 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm13815-201ENSMUST00000119963 412 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm14749-201ENSMUST00000121269 333 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm11838-201ENSMUST00000121999 231 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm12967-201ENSMUST00000122147 289 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm25178-201ENSMUST00000122633 325 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm26393-201ENSMUST00000157625 129 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm25898-201ENSMUST00000158303 106 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm3221-201ENSMUST00000164869 440 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm17223-201ENSMUST00000171413 481 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Spanxn4-201ENSMUST00000172433 424 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sf3b6P59708 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Sf3b6P59708 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.52□□□□□ -1.37
Sf3b6P59708 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms