Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LdlrP35951 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LdlrP35951 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LdlrP35951 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
LdlrP35951 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
LdlrP35951 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6.75□□□□□ -1.33
LdlrP35951 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LdlrP35951 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
LdlrP35951 Gm8421-201ENSMUST00000119439 305 ntBASIC6.75□□□□□ -1.33
LdlrP35951 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LdlrP35951 Gm16113-201ENSMUST00000159629 372 ntBASIC6.75□□□□□ -1.33
LdlrP35951 Gm29197-201ENSMUST00000185922 702 ntBASIC6.75□□□□□ -1.33
LdlrP35951 Gm20915-201ENSMUST00000191575 663 ntBASIC6.75□□□□□ -1.33
LdlrP35951 Gm37191-201ENSMUST00000193346 388 ntBASIC6.75□□□□□ -1.33
LdlrP35951 Gm37560-201ENSMUST00000194289 1000 ntBASIC6.75□□□□□ -1.33
LdlrP35951 Gm37901-201ENSMUST00000195107 514 ntBASIC6.75□□□□□ -1.33
LdlrP35951 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC6.75□□□□□ -1.33
LdlrP35951 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LdlrP35951 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LdlrP35951 Gm44111-201ENSMUST00000204649 399 ntBASIC6.75□□□□□ -1.33
LdlrP35951 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC6.75□□□□□ -1.33
LdlrP35951 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.75□□□□□ -1.33
LdlrP35951 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.75□□□□□ -1.33
LdlrP35951 AC123835.1-201ENSMUST00000214362 670 ntBASIC6.75□□□□□ -1.33
LdlrP35951 AC151971.2-201ENSMUST00000217540 909 ntBASIC6.75□□□□□ -1.33
LdlrP35951 AC151901.1-201ENSMUST00000218274 180 ntBASIC6.75□□□□□ -1.33
LdlrP35951 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.75□□□□□ -1.33
LdlrP35951 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.75□□□□□ -1.33
LdlrP35951 Gm18955-201ENSMUST00000223173 649 ntBASIC6.75□□□□□ -1.33
LdlrP35951 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.75□□□□□ -1.33
LdlrP35951 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
LdlrP35951 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
LdlrP35951 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
LdlrP35951 Gm26203-201ENSMUST00000082911 114 ntBASIC6.75□□□□□ -1.33
LdlrP35951 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
LdlrP35951 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
LdlrP35951 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.75□□□□□ -1.33
LdlrP35951 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
LdlrP35951 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.75□□□□□ -1.33
LdlrP35951 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
LdlrP35951 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.75□□□□□ -1.33
LdlrP35951 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
LdlrP35951 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LdlrP35951 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
LdlrP35951 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC6.75□□□□□ -1.33
LdlrP35951 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LdlrP35951 Gm16204-201ENSMUST00000117864 1897 ntBASIC6.75□□□□□ -1.33
LdlrP35951 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
LdlrP35951 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LdlrP35951 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
LdlrP35951 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.74□□□□□ -1.33
LdlrP35951 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LdlrP35951 Gm44417-201ENSMUST00000203298 3359 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
LdlrP35951 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC6.74□□□□□ -1.33
LdlrP35951 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
LdlrP35951 Gm44436-201ENSMUST00000204200 1494 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
LdlrP35951 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LdlrP35951 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LdlrP35951 Gm25877-201ENSMUST00000104326 129 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LdlrP35951 Gm17170-201ENSMUST00000112785 316 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Gm11858-201ENSMUST00000117935 838 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Gm11987-201ENSMUST00000118524 381 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Gm14863-201ENSMUST00000119648 307 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Gm14253-201ENSMUST00000122112 639 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.74□□□□□ -1.33
LdlrP35951 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.74□□□□□ -1.33
LdlrP35951 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.74□□□□□ -1.33
LdlrP35951 Gm16129-201ENSMUST00000152628 486 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LdlrP35951 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.74□□□□□ -1.33
LdlrP35951 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Gm8919-201ENSMUST00000182028 1014 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
LdlrP35951 Mir6244-201ENSMUST00000184156 117 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LdlrP35951 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.74□□□□□ -1.33
LdlrP35951 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC6.74□□□□□ -1.33
LdlrP35951 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Gm24826-202ENSMUST00000197298 216 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Gm8924-201ENSMUST00000197405 1132 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
LdlrP35951 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
LdlrP35951 Gm8703-201ENSMUST00000203793 730 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Gm44705-201ENSMUST00000206719 339 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LdlrP35951 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.74□□□□□ -1.33
LdlrP35951 Gm19217-201ENSMUST00000218238 328 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Gm3213-201ENSMUST00000219296 441 ntBASIC6.74□□□□□ -1.33
LdlrP35951 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
LdlrP35951 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
LdlrP35951 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
LdlrP35951 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
LdlrP35951 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms