Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.52□□□□□ -1.37
Lire1P11260 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Lire1P11260 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lire1P11260 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lire1P11260 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
Lire1P11260 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lire1P11260 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lire1P11260 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.52□□□□□ -1.37
Lire1P11260 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Lire1P11260 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Lire1P11260 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Lire1P11260 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lire1P11260 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Lire1P11260 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Lire1P11260 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC6.52□□□□□ -1.37
Lire1P11260 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Lire1P11260 Gm15739-201ENSMUST00000118049 872 ntBASIC6.52□□□□□ -1.37
Lire1P11260 Gm2199-201ENSMUST00000119065 874 ntBASIC6.52□□□□□ -1.37
Lire1P11260 Gm11928-201ENSMUST00000119323 437 ntBASIC6.52□□□□□ -1.37
Lire1P11260 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC6.52□□□□□ -1.37
Lire1P11260 Trav8-2-201ENSMUST00000130122 337 ntBASIC6.52□□□□□ -1.37
Lire1P11260 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.52□□□□□ -1.37
Lire1P11260 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC6.52□□□□□ -1.37
Lire1P11260 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.52□□□□□ -1.37
Lire1P11260 Gm24680-201ENSMUST00000158759 126 ntBASIC6.52□□□□□ -1.37
Lire1P11260 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.52□□□□□ -1.37
Lire1P11260 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Lire1P11260 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Lire1P11260 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC6.52□□□□□ -1.37
Lire1P11260 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Lire1P11260 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC6.52□□□□□ -1.37
Lire1P11260 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC6.52□□□□□ -1.37
Lire1P11260 Gm7412-201ENSMUST00000191692 605 ntBASIC6.52□□□□□ -1.37
Lire1P11260 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.52□□□□□ -1.37
Lire1P11260 Gm17833-201ENSMUST00000197629 1065 ntBASIC6.52□□□□□ -1.37
Lire1P11260 Gm5284-201ENSMUST00000199053 903 ntBASIC6.52□□□□□ -1.37
Lire1P11260 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.52□□□□□ -1.37
Lire1P11260 Gm44258-201ENSMUST00000204925 301 ntBASIC6.52□□□□□ -1.37
Lire1P11260 Gm44279-201ENSMUST00000205154 472 ntBASIC6.52□□□□□ -1.37
Lire1P11260 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC6.52□□□□□ -1.37
Lire1P11260 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Lire1P11260 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC6.52□□□□□ -1.37
Lire1P11260 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.52□□□□□ -1.37
Lire1P11260 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Lire1P11260 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.52□□□□□ -1.37
Lire1P11260 AC122309.1-201ENSMUST00000226945 421 ntBASIC6.52□□□□□ -1.37
Lire1P11260 Gm9985-201ENSMUST00000044101 510 ntBASIC6.52□□□□□ -1.37
Lire1P11260 n-R5s29-201ENSMUST00000082836 119 ntBASIC6.52□□□□□ -1.37
Lire1P11260 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
Lire1P11260 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Lire1P11260 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Lire1P11260 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lire1P11260 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.52□□□□□ -1.37
Lire1P11260 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Lire1P11260 AC154747.4-203ENSMUST00000225893 1384 ntBASIC6.52□□□□□ -1.37
Lire1P11260 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Lire1P11260 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lire1P11260 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lire1P11260 Gm2654-201ENSMUST00000221381 1592 ntBASIC6.52□□□□□ -1.37
Lire1P11260 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lire1P11260 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Lire1P11260 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Lire1P11260 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.51□□□□□ -1.37
Lire1P11260 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 Gm12346-201ENSMUST00000121455 2255 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.51□□□□□ -1.37
Lire1P11260 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Lire1P11260 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Lire1P11260 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Lire1P11260 Gm23437-201ENSMUST00000104036 127 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Gm26419-201ENSMUST00000104272 133 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Gm13486-201ENSMUST00000119910 282 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Gm12104-201ENSMUST00000120359 979 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Gm14796-201ENSMUST00000121216 959 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Gm11200-201ENSMUST00000121698 448 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC6.51□□□□□ -1.37
Lire1P11260 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.51□□□□□ -1.37
Lire1P11260 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 Gm20545-201ENSMUST00000174739 210 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Lire1P11260 Gm38177-201ENSMUST00000192213 1040 ntBASIC6.51□□□□□ -1.37
Lire1P11260 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms