Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC5.23□□□□□ -1.57
Hmgb3O54879 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm37625-201ENSMUST00000194969 4872 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm37626-201ENSMUST00000194332 4563 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC5.23□□□□□ -1.57
Hmgb3O54879 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb3O54879 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm43789-201ENSMUST00000199275 2472 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb3O54879 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb3O54879 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb3O54879 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb3O54879 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb3O54879 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb3O54879 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm7831-201ENSMUST00000117990 552 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm13742-201ENSMUST00000118805 457 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm12447-201ENSMUST00000119110 470 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm12123-201ENSMUST00000120348 472 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm11689-201ENSMUST00000120766 302 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm13462-201ENSMUST00000121472 961 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm11688-201ENSMUST00000122145 308 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm22235-201ENSMUST00000157085 110 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm25969-201ENSMUST00000157166 132 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm24756-201ENSMUST00000177002 96 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm27970-201ENSMUST00000184854 407 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm28546-201ENSMUST00000188221 615 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm7343-201ENSMUST00000194510 1061 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm42799-201ENSMUST00000201331 328 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm45509-201ENSMUST00000209624 1229 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm46203-201ENSMUST00000218130 478 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 AC153864.1-201ENSMUST00000218482 523 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm17611-202ENSMUST00000220613 814 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 AW822073-201ENSMUST00000075305 555 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 n-R5s29-201ENSMUST00000082836 119 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm23734-201ENSMUST00000083753 109 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm37951-201ENSMUST00000192963 3032 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb3O54879 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb3O54879 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb3O54879 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb3O54879 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC5.22□□□□□ -1.57
Hmgb3O54879 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Hmgb3O54879 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Hmgb3O54879 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.21□□□□□ -1.57
Hmgb3O54879 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Hmgb3O54879 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Hmgb3O54879 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Hmgb3O54879 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Hmgb3O54879 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Hmgb3O54879 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.21□□□□□ -1.58
Hmgb3O54879 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Hmgb3O54879 Phxr4-202ENSMUST00000216590 1391 ntBASIC5.21□□□□□ -1.58
Hmgb3O54879 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Hmgb3O54879 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms