Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Gm23426-201ENSMUST00000122483 318 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Gm24781-201ENSMUST00000157636 117 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Gm29357-201ENSMUST00000186877 698 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Gm37177-201ENSMUST00000193768 417 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Gm21461-201ENSMUST00000200382 863 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Gm43762-201ENSMUST00000201521 295 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Gm5324-201ENSMUST00000208115 476 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Gm45739-201ENSMUST00000213094 388 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Gm26130-201ENSMUST00000083171 138 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Gm7731-201ENSMUST00000091759 470 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Srp54bE9PXC0 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.36
Srp54bE9PXC0 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.59□□□□□ -1.36
Srp54bE9PXC0 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.59□□□□□ -1.36
Srp54bE9PXC0 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.59□□□□□ -1.36
Srp54bE9PXC0 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Srp54bE9PXC0 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.36
Srp54bE9PXC0 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm19210-201ENSMUST00000199562 1350 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm11462-201ENSMUST00000117749 562 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm11485-201ENSMUST00000120048 1175 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm15181-201ENSMUST00000120142 177 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm12400-201ENSMUST00000120915 1003 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm23903-201ENSMUST00000157566 131 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm25904-201ENSMUST00000158491 143 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm20691-201ENSMUST00000176889 333 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm26509-201ENSMUST00000180947 948 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm28586-201ENSMUST00000189857 456 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm42581-201ENSMUST00000201774 966 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm44162-201ENSMUST00000203543 544 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm19116-201ENSMUST00000218592 642 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 AC134917.2-201ENSMUST00000223354 124 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 AC154757.2-201ENSMUST00000228885 743 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Srp54bE9PXC0 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms