Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC5.48□□□□□ -1.53
Usf3B2RUQ2 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC5.48□□□□□ -1.53
Usf3B2RUQ2 Gm3555-201ENSMUST00000160287 1395 ntBASIC5.48□□□□□ -1.53
Usf3B2RUQ2 Gm23979-201ENSMUST00000104071 128 ntBASIC5.48□□□□□ -1.53
Usf3B2RUQ2 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.48□□□□□ -1.53
Usf3B2RUQ2 Gm12181-201ENSMUST00000121448 531 ntBASIC5.48□□□□□ -1.53
Usf3B2RUQ2 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.48□□□□□ -1.53
Usf3B2RUQ2 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usf3B2RUQ2 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC5.48□□□□□ -1.53
Usf3B2RUQ2 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC5.48□□□□□ -1.53
Usf3B2RUQ2 Gm45514-201ENSMUST00000211531 689 ntBASIC5.48□□□□□ -1.53
Usf3B2RUQ2 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC5.48□□□□□ -1.53
Usf3B2RUQ2 Gm5612-201ENSMUST00000053326 375 ntBASIC5.48□□□□□ -1.53
Usf3B2RUQ2 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usf3B2RUQ2 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usf3B2RUQ2 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Usf3B2RUQ2 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usf3B2RUQ2 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usf3B2RUQ2 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 AC153959.1-201ENSMUST00000213617 1694 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm14733-201ENSMUST00000117680 133 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm12101-201ENSMUST00000121590 390 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm24176-201ENSMUST00000158928 121 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 n-R5s109-201ENSMUST00000179195 119 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Mir6986-201ENSMUST00000184483 58 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm43945-201ENSMUST00000203595 754 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm43867-201ENSMUST00000203860 525 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm5418-201ENSMUST00000206932 528 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 AC154219.1-201ENSMUST00000220764 1262 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm6575-201ENSMUST00000222946 697 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm20749-201ENSMUST00000186319 3492 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 AC153143.1-201ENSMUST00000222966 1340 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 AC124516.2-201ENSMUST00000221455 1829 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm45297-201ENSMUST00000209893 3483 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm15616-201ENSMUST00000118662 375 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm3140-201ENSMUST00000163523 481 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm20491-201ENSMUST00000173765 1241 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm17048-201ENSMUST00000179266 847 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm2229-201ENSMUST00000193328 710 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm6077-201ENSMUST00000196008 499 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm8930-201ENSMUST00000201693 768 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm7554-201ENSMUST00000202282 574 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Gm6056-201ENSMUST00000221253 488 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 AC161252.1-201ENSMUST00000225536 467 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 AC156016.2-201ENSMUST00000228200 525 ntBASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Usf3B2RUQ2 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Usf3B2RUQ2 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Usf3B2RUQ2 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC5.46□□□□□ -1.53
Usf3B2RUQ2 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Usf3B2RUQ2 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Usf3B2RUQ2 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Usf3B2RUQ2 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Usf3B2RUQ2 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Usf3B2RUQ2 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Usf3B2RUQ2 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Usf3B2RUQ2 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.46□□□□□ -1.54
Usf3B2RUQ2 Gm7113-201ENSMUST00000120477 958 ntBASIC5.46□□□□□ -1.54
Usf3B2RUQ2 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC5.46□□□□□ -1.54
Usf3B2RUQ2 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Usf3B2RUQ2 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Usf3B2RUQ2 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Usf3B2RUQ2 Snora47-201ENSMUST00000157483 138 ntBASIC5.46□□□□□ -1.54
Usf3B2RUQ2 Gm25387-201ENSMUST00000157813 132 ntBASIC5.46□□□□□ -1.54
Usf3B2RUQ2 Gm18430-201ENSMUST00000197534 682 ntBASIC5.46□□□□□ -1.54
Usf3B2RUQ2 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC5.46□□□□□ -1.54
Usf3B2RUQ2 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC5.46□□□□□ -1.54
Usf3B2RUQ2 AC131795.1-201ENSMUST00000219632 426 ntBASIC5.46□□□□□ -1.54
Usf3B2RUQ2 AC107663.1-201ENSMUST00000224257 468 ntBASIC5.46□□□□□ -1.54
Usf3B2RUQ2 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.46□□□□□ -1.54
Usf3B2RUQ2 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Usf3B2RUQ2 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
Usf3B2RUQ2 Mir135a-1-201ENSMUST00000083473 90 ntBASIC5.46□□□□□ -1.54
Usf3B2RUQ2 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Usf3B2RUQ2 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms