Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm7731-201ENSMUST00000091759 470 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Trim3Q9R1R2 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
Trim3Q9R1R2 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.21□□□□□ -1.41
Trim3Q9R1R2 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.41
Trim3Q9R1R2 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.21□□□□□ -1.41
Trim3Q9R1R2 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm24473-201ENSMUST00000104483 131 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm24176-201ENSMUST00000158928 121 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm7289-201ENSMUST00000168993 734 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm44370-201ENSMUST00000175436 112 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Mir7212-201ENSMUST00000184098 61 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Ighv1-29-201ENSMUST00000194116 342 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm43390-201ENSMUST00000196614 421 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm44896-201ENSMUST00000206190 772 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm18781-201ENSMUST00000211252 924 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm4042-201ENSMUST00000216946 637 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 CT009495.1-201ENSMUST00000224221 862 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Glycam1-204ENSMUST00000228895 641 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Mir106b-201ENSMUST00000083580 82 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim3Q9R1R2 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Mir708-201ENSMUST00000102189 109 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms