Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm28272-201ENSMUST00000189512 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28483-201ENSMUST00000189519 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28123-201ENSMUST00000189725 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28368-201ENSMUST00000189804 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm29119-201ENSMUST00000189973 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28716-201ENSMUST00000190217 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm29239-201ENSMUST00000190304 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28837-201ENSMUST00000190397 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28968-201ENSMUST00000190413 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28531-201ENSMUST00000190529 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28165-201ENSMUST00000190669 694 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm29181-201ENSMUST00000191288 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm38229-201ENSMUST00000191931 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm32347-201ENSMUST00000192944 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm38121-201ENSMUST00000193213 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm38035-201ENSMUST00000194427 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm38350-201ENSMUST00000194789 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm37990-201ENSMUST00000195821 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm43141-201ENSMUST00000199695 274 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm45070-201ENSMUST00000208100 246 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm18601-201ENSMUST00000220831 634 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm9293-201ENSMUST00000223096 306 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm6327-201ENSMUST00000171185 1335 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm12242-201ENSMUST00000118824 738 ntBASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm12447-201ENSMUST00000119110 470 ntBASIC6.37□□□□□ -1.39
Lima1Q9ERG0 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC6.37□□□□□ -1.39
Lima1Q9ERG0 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.37□□□□□ -1.39
Lima1Q9ERG0 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm46203-201ENSMUST00000218130 478 ntBASIC6.37□□□□□ -1.39
Lima1Q9ERG0 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms