Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Gm18914-201ENSMUST00000214625 616 ntBASIC6.15□□□□□ -1.42
Cdc40Q9DC48 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.15□□□□□ -1.42
Cdc40Q9DC48 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 n-R5s97-201ENSMUST00000082585 113 ntBASIC6.15□□□□□ -1.42
Cdc40Q9DC48 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.15□□□□□ -1.43
Cdc40Q9DC48 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.15□□□□□ -1.43
Cdc40Q9DC48 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdc40Q9DC48 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Cdc40Q9DC48 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdc40Q9DC48 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdc40Q9DC48 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.15□□□□□ -1.43
Cdc40Q9DC48 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.15□□□□□ -1.43
Cdc40Q9DC48 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Cdc40Q9DC48 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Cdc40Q9DC48 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdc40Q9DC48 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
Cdc40Q9DC48 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.15□□□□□ -1.43
Cdc40Q9DC48 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Cdc40Q9DC48 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.15□□□□□ -1.43
Cdc40Q9DC48 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Cdc40Q9DC48 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Robo2-210ENSMUST00000226478 8059 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm15216-201ENSMUST00000118058 277 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm15616-201ENSMUST00000118662 375 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm12447-201ENSMUST00000119110 470 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm11485-201ENSMUST00000120048 1175 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm13669-201ENSMUST00000122366 457 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Mir5617-201ENSMUST00000176786 57 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm27507-201ENSMUST00000184199 93 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm37189-201ENSMUST00000192131 298 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm5711-201ENSMUST00000197896 421 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm43459-201ENSMUST00000202093 331 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm19324-201ENSMUST00000213229 1169 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm46203-201ENSMUST00000218130 478 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 AC156016.2-201ENSMUST00000228200 525 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 AC137950.3-201ENSMUST00000228250 246 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm22581-201ENSMUST00000083735 136 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm9575-201ENSMUST00000122140 1339 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.14□□□□□ -1.43
Cdc40Q9DC48 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdc40Q9DC48 Gm14550-201ENSMUST00000117918 407 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 124 ms