Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Chmp4bQ9D8B3 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Chmp4bQ9D8B3 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC8.29□□□□□ -1.08
Chmp4bQ9D8B3 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Chmp4bQ9D8B3 AC116950.1-201ENSMUST00000226322 3250 ntBASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gm38257-201ENSMUST00000195881 2761 ntBASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gm12229-201ENSMUST00000120487 468 ntBASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gm13877-201ENSMUST00000120614 417 ntBASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gm5166-201ENSMUST00000121332 573 ntBASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gm11545-201ENSMUST00000146507 375 ntBASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gm22235-201ENSMUST00000157085 110 ntBASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gm20432-201ENSMUST00000173716 250 ntBASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gm27866-201ENSMUST00000184459 171 ntBASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gm37152-201ENSMUST00000193369 1175 ntBASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gm44896-201ENSMUST00000206190 772 ntBASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 n-R5s95-201ENSMUST00000082684 118 ntBASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gm37216-201ENSMUST00000193817 3478 ntBASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Gm42503-201ENSMUST00000199080 3706 ntBASIC8.28□□□□□ -1.08
Chmp4bQ9D8B3 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.08
Chmp4bQ9D8B3 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Chmp4bQ9D8B3 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Gm25435-201ENSMUST00000158277 267 ntBASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Mir6908-201ENSMUST00000184056 63 ntBASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Gm27156-201ENSMUST00000184589 754 ntBASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Gm44147-201ENSMUST00000204658 94 ntBASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Gm18226-201ENSMUST00000215261 521 ntBASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 CT030645.2-201ENSMUST00000224321 1012 ntBASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 n-R5s217-201ENSMUST00000083341 116 ntBASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Gm44039-201ENSMUST00000204192 2246 ntBASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Chmp4bQ9D8B3 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Gm10568-201ENSMUST00000193244 1634 ntBASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Gm19368-201ENSMUST00000221258 4424 ntBASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Gm2178-201ENSMUST00000104927 357 ntBASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Gm15216-201ENSMUST00000118058 277 ntBASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Gm13444-201ENSMUST00000119445 522 ntBASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Gm4886-201ENSMUST00000121874 1176 ntBASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Gm8648-201ENSMUST00000122457 221 ntBASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Gm20926-201ENSMUST00000194457 696 ntBASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Gm9517-201ENSMUST00000195021 874 ntBASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Gm43383-201ENSMUST00000195981 469 ntBASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Gm45196-201ENSMUST00000206751 825 ntBASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 AC116319.2-201ENSMUST00000228159 984 ntBASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Mir138-2-201ENSMUST00000083578 71 ntBASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC8.26□□□□□ -1.09
Chmp4bQ9D8B3 Gm14886-201ENSMUST00000117208 2629 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms