Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 AC161247.1-201ENSMUST00000217744 2295 ntBASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Nsd1-207ENSMUST00000224973 9905 ntBASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Gm13176-201ENSMUST00000117910 477 ntBASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Gm11472-201ENSMUST00000121305 556 ntBASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Gm12540-201ENSMUST00000121938 319 ntBASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Mir1953-201ENSMUST00000157866 89 ntBASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Gm22990-201ENSMUST00000175427 89 ntBASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Gm5871-201ENSMUST00000176461 718 ntBASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Gm27186-201ENSMUST00000184223 307 ntBASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Gm28958-201ENSMUST00000185864 703 ntBASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Gm5244-202ENSMUST00000189517 743 ntBASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Gm44162-201ENSMUST00000203543 544 ntBASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Gm4042-201ENSMUST00000216946 637 ntBASIC7.4□□□□□ -1.22
Smc1aQ9CU62 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Gm18620-201ENSMUST00000222295 324 ntBASIC7.4□□□□□ -1.22
Smc1aQ9CU62 AC123665.3-201ENSMUST00000228735 1216 ntBASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Phxr4-202ENSMUST00000216590 1391 ntBASIC7.4□□□□□ -1.22
Smc1aQ9CU62 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Smc1aQ9CU62 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Smc1aQ9CU62 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Smc1aQ9CU62 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Smc1aQ9CU62 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Smc1aQ9CU62 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.23
Smc1aQ9CU62 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Smc1aQ9CU62 Gm43842-201ENSMUST00000202890 2982 ntBASIC7.4□□□□□ -1.23
Smc1aQ9CU62 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Smc1aQ9CU62 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
Smc1aQ9CU62 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Smc1aQ9CU62 Gm20749-201ENSMUST00000186319 3492 ntBASIC7.4□□□□□ -1.23
Smc1aQ9CU62 Gm37086-201ENSMUST00000193082 3452 ntBASIC7.4□□□□□ -1.23
Smc1aQ9CU62 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Smc1aQ9CU62 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.23
Smc1aQ9CU62 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.23
Smc1aQ9CU62 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Smc1aQ9CU62 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Mir697-201ENSMUST00000102316 109 ntBASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Gm13141-201ENSMUST00000117417 456 ntBASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Gm15696-201ENSMUST00000121730 445 ntBASIC7.39□□□□□ -1.23
Smc1aQ9CU62 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Gm23756-201ENSMUST00000157582 114 ntBASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Gm24228-201ENSMUST00000158829 129 ntBASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Gm20454-201ENSMUST00000172713 221 ntBASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Gm27804-201ENSMUST00000185135 119 ntBASIC7.39□□□□□ -1.23
Smc1aQ9CU62 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Gm29141-201ENSMUST00000190357 882 ntBASIC7.39□□□□□ -1.23
Smc1aQ9CU62 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Gm44565-201ENSMUST00000208194 269 ntBASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 AC122533.1-201ENSMUST00000225177 767 ntBASIC7.39□□□□□ -1.23
Smc1aQ9CU62 AC135086.1-201ENSMUST00000228621 817 ntBASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Gm37023-201ENSMUST00000192895 2426 ntBASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 AC125328.1-201ENSMUST00000226812 2265 ntBASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Smc1aQ9CU62 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms